Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12325

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,341,382	+				+0.9
2,341,383	-				-1.1
2,341,465	-				-1.0
2,341,621	+				+0.0
2,341,639	-				-1.6
2,341,640	+				-0.5
2,341,640	+				+0.2
2,341,640	+				-1.8
2,341,640	+				+1.0
2,341,641	-				+0.2
2,341,641	-				-0.2
2,341,641	-				+2.7
2,341,641	-				-0.5
2,341,641	-				-1.6
2,341,641	-				-0.5
2,341,673	+				+0.2
2,341,673	+				-1.2
2,341,758	+				+0.5
2,341,759	-				-0.0
2,341,864	-				-1.2
2,341,885	+				+2.1
2,341,894	-				-0.8
2,342,333	+				-1.2
2,342,360	+				+0.2
2,342,418	-		LU632_RS12325	0.21	+0.2
2,342,540	+		LU632_RS12325	0.51	-1.6
2,342,625	+		LU632_RS12325	0.72	-0.2
2,342,699	+				-0.3
2,342,700	-				-2.1
2,342,700	-				-0.5
2,342,700	-				+0.8
2,343,493	-	tus	LU632_RS12330	0.68	+0.4
2,343,705	+				+0.4