Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11975

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,273,117	-				-0.3
2,273,150	+				-1.1
2,273,297	-		LU632_RS11975	0.20	+0.9
2,273,331	-		LU632_RS11975	0.23	-0.3
2,274,241	+				-1.1
2,274,304	+				-0.3
2,274,328	+				-0.3
2,274,329	-				+2.1
2,274,329	-				+1.6
2,274,332	-				+0.2
2,274,336	-				+2.6
2,274,345	-				-0.7
2,274,351	-				-0.3
2,274,351	-				-0.2
2,274,359	+				+0.4
2,274,435	+				+0.0
2,274,444	+				-0.4
2,274,463	+				-0.7
2,274,506	-		LU632_RS11980	0.10	-1.6
2,274,506	-		LU632_RS11980	0.10	+0.5
2,274,579	+		LU632_RS11980	0.63	+0.1