Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10630

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
2,027,594	-		LU632_RS10620	0.24	-0.3
2,027,657	+		LU632_RS10620	0.37	-0.6
2,027,657	+		LU632_RS10620	0.37	-0.8
2,027,658	-		LU632_RS10620	0.38	-1.3
2,027,658	-		LU632_RS10620	0.38	+0.5
2,027,658	-		LU632_RS10620	0.38	+0.5
2,027,711	-		LU632_RS10620	0.49	-0.5
2,027,711	-		LU632_RS10620	0.49	-1.2
2,027,774	-		LU632_RS10620	0.62	-1.8
2,027,787	+		LU632_RS10620	0.64	+1.2
2,027,822	-		LU632_RS10620	0.72	+0.8
2,027,822	-		LU632_RS10620	0.72	+0.0
2,027,930	-				-0.1
2,027,957	-				-2.2
2,028,492	+		LU632_RS10625	0.84	-1.6
2,028,493	-		LU632_RS10625	0.84	-1.6
2,028,510	-		LU632_RS10625	0.87	-1.2
2,028,664	+		LU632_RS10630	0.20	-1.4
2,028,945	-		LU632_RS10630	0.85	-1.2
2,029,093	-				-0.5
2,029,106	-				-0.2