Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08705

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
1,636,123	-		LU632_RS08700	0.17	+1.8
1,636,175	+		LU632_RS08700	0.22	+0.7
1,636,272	+		LU632_RS08700	0.33	+0.1
1,636,273	-		LU632_RS08700	0.33	-0.8
1,636,273	-		LU632_RS08700	0.33	+0.1
1,636,321	-		LU632_RS08700	0.38	+0.6
1,636,321	-		LU632_RS08700	0.38	-1.2
1,636,333	-		LU632_RS08700	0.39	+0.1
1,636,373	+		LU632_RS08700	0.43	+1.6
1,636,374	-		LU632_RS08700	0.43	-0.1
1,636,379	-		LU632_RS08700	0.44	-0.2
1,636,433	+		LU632_RS08700	0.49	+0.1
1,636,437	+		LU632_RS08700	0.50	-0.7
1,636,592	+		LU632_RS08700	0.66	+0.1
1,636,592	+		LU632_RS08700	0.66	+0.8
1,636,593	-		LU632_RS08700	0.66	-0.5
1,636,593	-		LU632_RS08700	0.66	-0.1
1,636,596	+		LU632_RS08700	0.66	+2.8
1,636,600	-		LU632_RS08700	0.67	-1.8
1,636,697	+		LU632_RS08700	0.77	-1.1
1,636,824	-				-0.4
1,636,868	+				+1.0
1,636,881	-				-0.4
1,636,886	+				-0.2
1,636,938	+				-0.2
1,636,938	+				+0.5
1,636,938	+				-1.6
1,636,938	+				+1.8
1,636,939	-				+1.9
1,636,939	-				-1.9
1,636,956	+				-0.1
1,636,973	+				-0.5
1,636,974	-				-0.4
1,637,102	-				-0.8
1,637,147	+	yegD	LU632_RS08705	0.10	-0.1
1,637,148	-	yegD	LU632_RS08705	0.11	+3.7
1,637,148	-	yegD	LU632_RS08705	0.11	+0.1
1,637,148	-	yegD	LU632_RS08705	0.11	+4.1
1,637,148	-	yegD	LU632_RS08705	0.11	+0.7
1,637,251	+	yegD	LU632_RS08705	0.18	-2.2
1,637,252	-	yegD	LU632_RS08705	0.18	+0.2
1,637,252	-	yegD	LU632_RS08705	0.18	+0.6
1,637,252	-	yegD	LU632_RS08705	0.18	+0.7
1,637,252	-	yegD	LU632_RS08705	0.18	+3.4
1,637,253	+	yegD	LU632_RS08705	0.18	-2.1
1,637,253	+	yegD	LU632_RS08705	0.18	-0.6
1,637,253	+	yegD	LU632_RS08705	0.18	+0.8
1,637,254	-	yegD	LU632_RS08705	0.18	-0.6
1,637,355	-	yegD	LU632_RS08705	0.26	+0.3
1,637,355	-	yegD	LU632_RS08705	0.26	+0.1
1,637,456	+	yegD	LU632_RS08705	0.33	+0.3
1,637,456	+	yegD	LU632_RS08705	0.33	+0.3
1,637,586	+	yegD	LU632_RS08705	0.43	+0.3
1,637,586	+	yegD	LU632_RS08705	0.43	-0.4
1,637,586	+	yegD	LU632_RS08705	0.43	+0.4
1,637,586	+	yegD	LU632_RS08705	0.43	+0.5
1,637,587	-	yegD	LU632_RS08705	0.43	+0.2
1,637,587	-	yegD	LU632_RS08705	0.43	+0.3
1,637,590	-	yegD	LU632_RS08705	0.43	+0.4
1,637,623	-	yegD	LU632_RS08705	0.46	+0.1
1,638,040	+	yegD	LU632_RS08705	0.76	-1.0
1,638,041	-	yegD	LU632_RS08705	0.77	-1.3
1,638,069	+	yegD	LU632_RS08705	0.79	-1.1
1,638,069	+	yegD	LU632_RS08705	0.79	+0.1
1,638,071	+	yegD	LU632_RS08705	0.79	+0.1
1,638,071	+	yegD	LU632_RS08705	0.79	-0.9
1,638,071	+	yegD	LU632_RS08705	0.79	-0.3
1,638,071	+	yegD	LU632_RS08705	0.79	+1.1
1,638,071	+	yegD	LU632_RS08705	0.79	+0.1
1,638,072	-	yegD	LU632_RS08705	0.79	-0.9
1,638,072	-	yegD	LU632_RS08705	0.79	-1.2
1,638,072	-	yegD	LU632_RS08705	0.79	-1.8
1,638,339	-				+0.6
1,638,353	+				-0.7
1,638,353	+				+0.1
1,638,353	+				-0.6
1,638,353	+				+1.0
1,638,354	-				+0.2
1,638,354	-				-0.8
1,638,354	-				-2.0
1,638,379	-				-0.7
1,638,397	-				-0.7
1,638,410	-				-0.7
1,638,410	-				-0.6
1,638,410	-				-0.6
1,638,410	-				+0.1
1,639,099	+				+0.9
1,639,100	-				+1.3
1,639,150	+				+0.6
1,639,151	-				-0.6
1,639,152	+				-0.8
1,639,153	-				+0.1
1,639,189	+				+0.2
1,639,189	+				-1.2
1,639,189	+				-0.6
1,639,190	-				+1.1
1,639,190	-				+0.1
1,639,190	-				-1.7
1,639,216	+				+0.3
1,639,217	-				+0.5
1,639,269	+				+1.1
1,639,270	-				+0.3
1,639,287	-				+0.4