Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07875

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
1,470,381	+	purF	LU632_RS07865	0.81	-2.4
1,470,382	-	purF	LU632_RS07865	0.81	-3.0
1,470,382	-	purF	LU632_RS07865	0.81	+0.1
1,470,382	-	purF	LU632_RS07865	0.81	-2.4
1,470,382	-	purF	LU632_RS07865	0.81	-1.2
1,470,551	-				-3.7
1,470,578	-				-1.5
1,470,689	-				+2.1
1,470,695	+				+0.1
1,470,695	+				+4.0
1,470,698	+				+1.3
1,470,698	+				-0.3
1,470,698	+				-1.2
1,470,698	+				-0.7
1,470,698	+				-0.7
1,470,698	+				-0.2
1,470,698	+				-0.0
1,470,699	-				+0.1
1,470,699	-				+1.6
1,470,699	-				-0.7
1,470,714	+				-1.2
1,471,336	+				-0.5
1,471,337	-				-0.6
1,471,398	-				+0.9
1,471,566	-		LU632_RS07875	0.49	-0.3
1,471,681	+		LU632_RS07875	0.78	-0.2
1,471,736	-				-0.7
1,471,736	-				-1.1
1,471,764	+				-0.2
1,471,764	+				+0.2
1,471,765	-				-0.9
1,471,897	+				+1.3
1,471,947	+				+0.6
1,471,947	+				-0.5
1,472,033	+				+1.3
1,472,033	+				+0.5
1,472,033	+				-0.5
1,472,034	-				-1.4
1,472,034	-				-0.2
1,472,034	-				+0.1
1,472,082	+				-0.2
1,472,082	+				+0.1
1,472,088	-				+1.1
1,472,133	+				-0.1
1,472,236	+		LU632_RS07880	0.17	-0.5
1,472,289	+		LU632_RS07880	0.23	-1.2
1,472,289	+		LU632_RS07880	0.23	+1.1
1,472,289	+		LU632_RS07880	0.23	-0.1
1,472,289	+		LU632_RS07880	0.23	-0.0
1,472,290	-		LU632_RS07880	0.23	-0.0
1,472,293	+		LU632_RS07880	0.23	+0.1
1,472,293	+		LU632_RS07880	0.23	+0.2
1,472,294	-		LU632_RS07880	0.23	+0.3
1,472,294	-		LU632_RS07880	0.23	-1.1
1,472,299	-		LU632_RS07880	0.24	+0.5
1,472,341	-		LU632_RS07880	0.29	-1.3
1,472,379	+		LU632_RS07880	0.33	-0.1
1,472,396	+		LU632_RS07880	0.35	+0.4
1,472,396	+		LU632_RS07880	0.35	-1.3
1,472,397	-		LU632_RS07880	0.35	+1.9
1,472,397	-		LU632_RS07880	0.35	+0.4
1,472,497	+		LU632_RS07880	0.46	-2.7
1,472,627	+		LU632_RS07880	0.61	+2.1
1,472,628	-		LU632_RS07880	0.61	-0.4
1,472,630	+		LU632_RS07880	0.61	-0.3
1,472,653	-		LU632_RS07880	0.63	-0.5
1,472,682	+		LU632_RS07880	0.67	+0.8
1,472,682	+		LU632_RS07880	0.67	+1.6
1,472,683	-		LU632_RS07880	0.67	+0.4
1,472,683	-		LU632_RS07880	0.67	-0.7
1,472,687	-		LU632_RS07880	0.67	-0.6