Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07165

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
1,355,321	+				-0.8
1,355,374	+		LU632_RS07155	0.10	+1.3
1,355,374	+		LU632_RS07155	0.10	-0.1
1,355,421	+		LU632_RS07155	0.22	-0.2
1,355,421	+		LU632_RS07155	0.22	+1.9
1,355,424	+		LU632_RS07155	0.23	+1.1
1,355,424	+		LU632_RS07155	0.23	+0.1
1,355,473	-		LU632_RS07155	0.36	+0.1
1,355,540	-		LU632_RS07155	0.53	+0.2
1,355,604	-		LU632_RS07155	0.69	-0.2
1,355,681	-		LU632_RS07155	0.89	-1.0
1,355,692	+				-2.4
1,355,692	+				+0.1
1,355,824	+		LU632_RS07160	0.21	+0.1
1,355,826	+		LU632_RS07160	0.21	-1.0
1,355,857	+		LU632_RS07160	0.26	-0.9
1,355,871	+		LU632_RS07160	0.29	+3.4
1,355,929	+		LU632_RS07160	0.39	-1.1
1,355,932	+		LU632_RS07160	0.40	+0.3
1,355,932	+		LU632_RS07160	0.40	-0.2
1,355,932	+		LU632_RS07160	0.40	+0.1
1,355,932	+		LU632_RS07160	0.40	-0.5
1,355,933	-		LU632_RS07160	0.40	+2.0
1,355,933	-		LU632_RS07160	0.40	-0.2
1,356,085	+		LU632_RS07160	0.67	-1.1
1,356,085	+		LU632_RS07160	0.67	-0.6
1,356,085	+		LU632_RS07160	0.67	+0.2
1,356,086	-		LU632_RS07160	0.67	+0.9
1,356,158	-		LU632_RS07160	0.80	-0.2
1,356,169	+		LU632_RS07160	0.81	-0.0
1,356,170	-		LU632_RS07160	0.82	+0.6
1,356,170	-		LU632_RS07160	0.82	-0.9
1,356,170	-		LU632_RS07160	0.82	+0.5
1,356,211	+		LU632_RS07160	0.89	+0.0
1,356,272	-				+0.6
1,356,307	-				-1.1
1,356,338	-				+0.0
1,356,354	+				+0.1
1,356,354	+				+0.3
1,356,355	-				-0.2
1,356,355	-				-0.1
1,356,436	-		LU632_RS07165	0.13	+1.1
1,356,436	-		LU632_RS07165	0.13	+0.2
1,356,467	+		LU632_RS07165	0.16	-0.2
1,356,468	-		LU632_RS07165	0.16	-2.2
1,356,574	+		LU632_RS07165	0.25	+0.7
1,356,667	+		LU632_RS07165	0.33	-2.4
1,356,667	+		LU632_RS07165	0.33	-1.4
1,356,668	-		LU632_RS07165	0.33	-1.2
1,356,678	+		LU632_RS07165	0.34	+0.1
1,356,707	+		LU632_RS07165	0.36	-2.1
1,356,708	-		LU632_RS07165	0.36	-1.2
1,356,708	-		LU632_RS07165	0.36	+0.5
1,356,708	-		LU632_RS07165	0.36	-0.0
1,356,750	+		LU632_RS07165	0.40	-0.4
1,356,750	+		LU632_RS07165	0.40	-0.1
1,356,753	+		LU632_RS07165	0.40	+1.1
1,356,948	+		LU632_RS07165	0.57	+1.3
1,356,948	+		LU632_RS07165	0.57	-0.9
1,357,005	-		LU632_RS07165	0.61	+1.9
1,357,039	+		LU632_RS07165	0.64	+0.5
1,357,039	+		LU632_RS07165	0.64	-0.8
1,357,055	+		LU632_RS07165	0.66	+1.1
1,357,055	+		LU632_RS07165	0.66	-0.1
1,357,055	+		LU632_RS07165	0.66	+0.1
1,357,056	-		LU632_RS07165	0.66	-0.7
1,357,056	-		LU632_RS07165	0.66	+1.0
1,357,104	+		LU632_RS07165	0.70	-1.5
1,357,109	+		LU632_RS07165	0.70	+0.2
1,357,109	+		LU632_RS07165	0.70	+1.4
1,357,110	-		LU632_RS07165	0.70	+0.0
1,357,171	+		LU632_RS07165	0.76	-0.1
1,357,171	+		LU632_RS07165	0.76	-0.6
1,357,176	-		LU632_RS07165	0.76	-1.1
1,357,176	-		LU632_RS07165	0.76	-2.0
1,357,205	-		LU632_RS07165	0.78	-0.1
1,357,271	+		LU632_RS07165	0.84	-0.2
1,357,271	+		LU632_RS07165	0.84	-0.9
1,357,272	-		LU632_RS07165	0.84	-0.4
1,357,317	+		LU632_RS07165	0.88	-0.5
1,357,360	+				+0.3
1,357,361	-				-0.5
1,357,380	+				-0.2
1,357,381	-				+0.2
1,357,381	-				-0.5
1,357,382	+				-1.2
1,357,496	+				-2.9
1,357,541	+				+0.5
1,357,546	+				+0.8
1,357,604	+				+3.3
1,357,842	-		LU632_RS07170	0.17	-0.2
1,358,061	+		LU632_RS07170	0.27	-1.6
1,358,061	+		LU632_RS07170	0.27	-0.7
1,358,129	-		LU632_RS07170	0.30	-0.5
1,358,166	+		LU632_RS07170	0.32	-1.8
1,358,167	-		LU632_RS07170	0.32	+0.5
1,358,167	-		LU632_RS07170	0.32	-1.0
1,358,341	-		LU632_RS07170	0.39	+0.4
1,358,396	-		LU632_RS07170	0.42	-0.5