Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04945

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
963,749	+				-1.2
963,750	-				+0.5
963,752	+				+1.7
963,752	+				+1.1
963,753	-				-1.1
963,753	-				+0.2
963,753	-				-1.0
963,795	+				-0.6
963,798	-				-1.0
963,798	-				-1.5
963,798	-				-0.2
963,884	-		LU632_RS04940	0.20	+1.4
964,008	-		LU632_RS04940	0.36	+0.5
964,022	-		LU632_RS04940	0.38	+1.1
964,026	+		LU632_RS04940	0.39	-1.8
964,055	+		LU632_RS04940	0.43	+1.1
964,066	+		LU632_RS04940	0.44	-0.2
964,153	+		LU632_RS04940	0.55	+0.1
964,153	+		LU632_RS04940	0.55	-0.5
964,153	+		LU632_RS04940	0.55	+1.7
964,154	-		LU632_RS04940	0.56	-0.2
964,154	-		LU632_RS04940	0.56	+0.5
964,162	-		LU632_RS04940	0.57	-0.6
964,162	-		LU632_RS04940	0.57	+2.1
964,183	+		LU632_RS04940	0.59	-0.2
964,184	-		LU632_RS04940	0.60	-0.2
964,337	+		LU632_RS04940	0.80	-1.1
964,364	-		LU632_RS04940	0.83	-1.5
964,380	+		LU632_RS04940	0.85	-1.2
964,451	+				-1.0
964,489	-				-0.7
964,489	-				-1.2
964,514	-				+1.4
964,563	+				-0.3
964,671	-		LU632_RS04945	0.36	+0.5
964,839	-				+0.7
964,859	+				-0.4
964,859	+				+1.1
964,918	-				-1.0
964,978	+				+0.4
965,045	+				-1.2
965,046	-				-0.3
965,154	+				+0.1
965,154	+				+1.1