Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS02650

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
529,943	+				+0.1
529,956	+				-0.6
529,999	+				-0.8
530,065	-				+1.0
530,081	+				+1.2
530,117	+				-0.2
530,267	-				+1.8
530,270	+				+0.8
530,271	-				-0.0
530,294	+				+0.9
530,294	+				+4.8
530,302	-				-0.6
530,334	+				+3.6
530,373	-				-0.7
530,428	+	satP	LU632_RS02650	0.17	-1.3
530,429	-	satP	LU632_RS02650	0.17	-1.2
530,457	-	satP	LU632_RS02650	0.22	-0.1
530,462	-	satP	LU632_RS02650	0.23	-1.9
530,504	+	satP	LU632_RS02650	0.30	+1.6
530,504	+	satP	LU632_RS02650	0.30	-1.4
530,656	+	satP	LU632_RS02650	0.57	+0.6
530,729	-	satP	LU632_RS02650	0.69	+0.8
530,902	+				+0.4
530,903	-				-1.1
530,903	-				+0.6
530,903	-				+1.6
530,943	+				-1.6
530,988	-				+0.5
530,988	-				-0.4
530,990	+				+0.8
531,157	+				+0.7
531,157	+				-1.4
531,157	+				-1.3
531,157	+				+1.0
531,157	+				+0.3
531,157	+				-1.3