Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00540

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
112,975	+				-0.3
112,976	-				+1.5
112,976	-				-0.2
113,105	-				-0.9
113,124	-				+1.1
113,168	+				+0.4
113,169	-				-1.2
113,169	-				+0.1
113,209	-				+0.5
113,245	+				+0.5
113,246	-				+0.9
113,246	-				-0.5
113,247	+				+0.0
113,247	+				-0.4
113,248	-				-1.1
113,248	-				-0.5
113,248	-				-0.5
113,248	-				+0.4
113,293	-		LU632_RS00535	0.17	-0.9
113,340	-		LU632_RS00535	0.34	-1.4
113,414	-		LU632_RS00535	0.61	-0.5
113,470	-		LU632_RS00535	0.82	-1.4
113,516	-				+1.3
113,525	+				+0.9
113,525	+				-1.2
113,526	-				-0.2
113,604	+				-0.3
113,605	-				+0.1
113,612	-				-0.4
113,677	-				-0.6
114,896	+				+0.9
115,084	-				+1.0
115,084	-				+1.4
115,123	-				-1.6
115,126	-				+0.3
115,126	-				-0.1
115,200	+		LU632_RS00545	0.17	+1.6
115,203	+		LU632_RS00545	0.18	+2.3
115,204	-		LU632_RS00545	0.18	+0.7
115,204	-		LU632_RS00545	0.18	-0.4
115,376	-		LU632_RS00545	0.49	-0.1
115,376	-		LU632_RS00545	0.49	+0.1
115,440	+		LU632_RS00545	0.61	+2.6
115,441	-		LU632_RS00545	0.61	-0.3
115,452	+		LU632_RS00545	0.63	-0.6
115,453	-		LU632_RS00545	0.63	-0.5
115,463	+		LU632_RS00545	0.65	+0.0
115,498	+		LU632_RS00545	0.71	-0.9
115,499	-		LU632_RS00545	0.71	-0.5
115,499	-		LU632_RS00545	0.71	-0.4
115,541	-		LU632_RS00545	0.79	-0.5
115,563	-		LU632_RS00545	0.83	+0.2
115,569	+		LU632_RS00545	0.84	+1.8
115,602	+				-0.1
115,608	+				-0.8
115,622	-				+0.5
115,655	-				-1.5
115,667	+				+0.1
115,667	+				-0.7
115,667	+				+0.9
115,668	-				+0.4
115,668	-				+0.7
115,668	-				+0.3
115,671	+				-2.2
115,671	+				-0.5
115,671	+				+3.3
115,672	-				-0.7
115,672	-				-0.1
115,672	-				-0.2
115,672	-				+0.5
115,701	+				-0.1
115,749	-				-1.4
115,776	+				-2.5
115,777	-				-0.1
115,778	+				+0.3
115,779	-				-0.0
115,779	-				-0.8
115,779	-				-0.3