Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00420

Experiment: plant=Melon; plant sample=M4; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M4; plant location=P2
87,626	+				-0.7
87,770	+		LU632_RS00420	0.27	+0.1
87,770	+		LU632_RS00420	0.27	-0.3
87,960	+		LU632_RS00420	0.61	+0.9
88,556	-	sctJ	LU632_RS00425	0.50	-0.1
88,619	-	sctJ	LU632_RS00425	0.58	+0.2
88,711	-	sctJ	LU632_RS00425	0.70	-1.8
88,740	-	sctJ	LU632_RS00425	0.74	-0.3
88,759	+	sctJ	LU632_RS00425	0.76	+0.2
88,766	-	sctJ	LU632_RS00425	0.77	-0.7
88,804	+	sctJ	LU632_RS00425	0.82	-1.7