Strain Fitness in Erwinia amylovora T8 around OLJFJH_09015

Experiment: Matrix:KB soft agar;Phage:PBS;Temp:28;Samp:32-5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_09010 and OLJFJH_09015 are separated by 321 nucleotidesOLJFJH_09015 and OLJFJH_09020 overlap by 8 nucleotides OLJFJH_09010: OLJFJH_09010 - hypothetical protein, at 1,861,813 to 1,862,664 _09010 OLJFJH_09015: OLJFJH_09015 - bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase, at 1,862,986 to 1,865,145 _09015 OLJFJH_09020: OLJFJH_09020 - lysophospholipid transporter LplT, at 1,865,138 to 1,866,343 _09020 Position (kb) 1862 1863 1864 1865 1866Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1862.163 kb on - strand, within OLJFJH_09010at 1862.177 kb on - strand, within OLJFJH_09010at 1862.183 kb on - strand, within OLJFJH_09010at 1862.293 kb on + strand, within OLJFJH_09010at 1862.348 kb on + strand, within OLJFJH_09010at 1862.402 kb on + strand, within OLJFJH_09010at 1862.403 kb on - strand, within OLJFJH_09010at 1862.406 kb on + strand, within OLJFJH_09010at 1862.407 kb on - strand, within OLJFJH_09010at 1862.440 kb on + strand, within OLJFJH_09010at 1862.668 kb on - strandat 1862.744 kb on - strandat 1862.784 kb on + strandat 1862.789 kb on - strandat 1862.789 kb on - strandat 1862.866 kb on - strandat 1862.950 kb on - strandat 1862.986 kb on - strandat 1863.003 kb on - strandat 1863.181 kb on + strandat 1863.181 kb on + strandat 1863.181 kb on + strandat 1863.182 kb on - strandat 1863.182 kb on - strandat 1863.182 kb on - strandat 1863.182 kb on - strandat 1863.184 kb on - strandat 1863.184 kb on - strandat 1863.338 kb on - strand, within OLJFJH_09015at 1863.462 kb on + strand, within OLJFJH_09015at 1863.558 kb on + strand, within OLJFJH_09015at 1863.558 kb on + strand, within OLJFJH_09015at 1863.561 kb on + strand, within OLJFJH_09015at 1863.561 kb on + strand, within OLJFJH_09015at 1863.561 kb on + strand, within OLJFJH_09015at 1863.561 kb on + strand, within OLJFJH_09015at 1863.562 kb on - strand, within OLJFJH_09015at 1863.562 kb on - strand, within OLJFJH_09015at 1863.654 kb on + strand, within OLJFJH_09015at 1863.667 kb on - strand, within OLJFJH_09015at 1863.667 kb on - strand, within OLJFJH_09015at 1863.685 kb on + strand, within OLJFJH_09015at 1863.685 kb on + strand, within OLJFJH_09015at 1863.685 kb on + strand, within OLJFJH_09015at 1863.686 kb on - strand, within OLJFJH_09015at 1863.754 kb on + strand, within OLJFJH_09015at 1863.754 kb on + strand, within OLJFJH_09015at 1863.754 kb on + strand, within OLJFJH_09015at 1863.756 kb on + strand, within OLJFJH_09015at 1863.757 kb on - strand, within OLJFJH_09015at 1863.839 kb on + strand, within OLJFJH_09015at 1863.840 kb on - strand, within OLJFJH_09015at 1863.928 kb on - strand, within OLJFJH_09015at 1863.980 kb on - strand, within OLJFJH_09015at 1864.018 kb on - strand, within OLJFJH_09015at 1864.147 kb on - strand, within OLJFJH_09015at 1864.147 kb on - strand, within OLJFJH_09015at 1864.212 kb on + strand, within OLJFJH_09015at 1864.339 kb on + strand, within OLJFJH_09015at 1864.340 kb on - strand, within OLJFJH_09015at 1864.348 kb on - strand, within OLJFJH_09015at 1864.354 kb on - strand, within OLJFJH_09015at 1864.391 kb on - strand, within OLJFJH_09015at 1864.391 kb on - strand, within OLJFJH_09015at 1864.503 kb on + strand, within OLJFJH_09015at 1864.672 kb on - strand, within OLJFJH_09015at 1864.762 kb on + strand, within OLJFJH_09015at 1864.763 kb on - strand, within OLJFJH_09015at 1864.776 kb on + strand, within OLJFJH_09015at 1865.058 kb on - strandat 1865.144 kb on - strandat 1865.193 kb on + strandat 1865.274 kb on - strand, within OLJFJH_09020at 1865.321 kb on + strand, within OLJFJH_09020at 1865.321 kb on + strand, within OLJFJH_09020at 1865.322 kb on - strand, within OLJFJH_09020at 1865.322 kb on - strand, within OLJFJH_09020at 1865.322 kb on - strand, within OLJFJH_09020at 1865.327 kb on - strand, within OLJFJH_09020at 1865.327 kb on - strand, within OLJFJH_09020at 1865.327 kb on - strand, within OLJFJH_09020at 1865.429 kb on - strand, within OLJFJH_09020at 1865.992 kb on + strand, within OLJFJH_09020at 1865.992 kb on + strand, within OLJFJH_09020at 1865.992 kb on + strand, within OLJFJH_09020at 1865.993 kb on - strand, within OLJFJH_09020at 1866.062 kb on + strand, within OLJFJH_09020at 1866.062 kb on + strand, within OLJFJH_09020at 1866.062 kb on + strand, within OLJFJH_09020at 1866.063 kb on - strand, within OLJFJH_09020at 1866.063 kb on - strand, within OLJFJH_09020

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:KB soft agar;Phage:PBS;Temp:28;Samp:32-5
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1,862,163 - OLJFJH_09010 0.41 +0.0
1,862,177 - OLJFJH_09010 0.43 -0.6
1,862,183 - OLJFJH_09010 0.43 -0.5
1,862,293 + OLJFJH_09010 0.56 +1.6
1,862,348 + OLJFJH_09010 0.63 +0.5
1,862,402 + OLJFJH_09010 0.69 -0.2
1,862,403 - OLJFJH_09010 0.69 +0.4
1,862,406 + OLJFJH_09010 0.70 -0.1
1,862,407 - OLJFJH_09010 0.70 +0.2
1,862,440 + OLJFJH_09010 0.74 +0.3
1,862,668 - -0.2
1,862,744 - -0.7
1,862,784 + -0.4
1,862,789 - +0.9
1,862,789 - -2.2
1,862,866 - -1.6
1,862,950 - -0.7
1,862,986 - -0.9
1,863,003 - +0.5
1,863,181 + +0.6
1,863,181 + -0.1
1,863,181 + -1.2
1,863,182 - -1.7
1,863,182 - -0.3
1,863,182 - -1.6
1,863,182 - +0.4
1,863,184 - -0.5
1,863,184 - -0.8
1,863,338 - OLJFJH_09015 0.16 -0.5
1,863,462 + OLJFJH_09015 0.22 -0.2
1,863,558 + OLJFJH_09015 0.26 -0.1
1,863,558 + OLJFJH_09015 0.26 -1.2
1,863,561 + OLJFJH_09015 0.27 -2.6
1,863,561 + OLJFJH_09015 0.27 -0.5
1,863,561 + OLJFJH_09015 0.27 -1.0
1,863,561 + OLJFJH_09015 0.27 -0.5
1,863,562 - OLJFJH_09015 0.27 -0.4
1,863,562 - OLJFJH_09015 0.27 -0.2
1,863,654 + OLJFJH_09015 0.31 -0.2
1,863,667 - OLJFJH_09015 0.32 +0.1
1,863,667 - OLJFJH_09015 0.32 +0.3
1,863,685 + OLJFJH_09015 0.32 -0.5
1,863,685 + OLJFJH_09015 0.32 +0.2
1,863,685 + OLJFJH_09015 0.32 -0.5
1,863,686 - OLJFJH_09015 0.32 -0.2
1,863,754 + OLJFJH_09015 0.36 -0.7
1,863,754 + OLJFJH_09015 0.36 -0.0
1,863,754 + OLJFJH_09015 0.36 -0.4
1,863,756 + OLJFJH_09015 0.36 +0.5
1,863,757 - OLJFJH_09015 0.36 -3.0
1,863,839 + OLJFJH_09015 0.39 -0.8
1,863,840 - OLJFJH_09015 0.40 -0.8
1,863,928 - OLJFJH_09015 0.44 -0.6
1,863,980 - OLJFJH_09015 0.46 -0.8
1,864,018 - OLJFJH_09015 0.48 -0.8
1,864,147 - OLJFJH_09015 0.54 -0.2
1,864,147 - OLJFJH_09015 0.54 -0.8
1,864,212 + OLJFJH_09015 0.57 -0.5
1,864,339 + OLJFJH_09015 0.63 -0.9
1,864,340 - OLJFJH_09015 0.63 +0.3
1,864,348 - OLJFJH_09015 0.63 +0.4
1,864,354 - OLJFJH_09015 0.63 -0.8
1,864,391 - OLJFJH_09015 0.65 -0.3
1,864,391 - OLJFJH_09015 0.65 -0.9
1,864,503 + OLJFJH_09015 0.70 -0.5
1,864,672 - OLJFJH_09015 0.78 +0.1
1,864,762 + OLJFJH_09015 0.82 -0.1
1,864,763 - OLJFJH_09015 0.82 -0.9
1,864,776 + OLJFJH_09015 0.83 -0.3
1,865,058 - -0.4
1,865,144 - -1.9
1,865,193 + -0.2
1,865,274 - OLJFJH_09020 0.11 -1.8
1,865,321 + OLJFJH_09020 0.15 +0.4
1,865,321 + OLJFJH_09020 0.15 -1.0
1,865,322 - OLJFJH_09020 0.15 +0.2
1,865,322 - OLJFJH_09020 0.15 -0.2
1,865,322 - OLJFJH_09020 0.15 -0.5
1,865,327 - OLJFJH_09020 0.16 -0.2
1,865,327 - OLJFJH_09020 0.16 -1.6
1,865,327 - OLJFJH_09020 0.16 -1.4
1,865,429 - OLJFJH_09020 0.24 +0.4
1,865,992 + OLJFJH_09020 0.71 +0.7
1,865,992 + OLJFJH_09020 0.71 +2.3
1,865,992 + OLJFJH_09020 0.71 -2.5
1,865,993 - OLJFJH_09020 0.71 +0.2
1,866,062 + OLJFJH_09020 0.77 -0.3
1,866,062 + OLJFJH_09020 0.77 -0.1
1,866,062 + OLJFJH_09020 0.77 -0.1
1,866,063 - OLJFJH_09020 0.77 +0.8
1,866,063 - OLJFJH_09020 0.77 +0.1

Or see this region's nucleotide sequence