Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23110

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
4,403,026	-				-0.2
4,403,318	+				+2.9
4,403,361	+				-0.4
4,404,185	+		LU632_RS23115	0.16	-0.9
4,404,186	+		LU632_RS23115	0.16	-0.9
4,404,186	+		LU632_RS23115	0.16	-0.0
4,404,187	-		LU632_RS23115	0.16	+0.5
4,404,187	-		LU632_RS23115	0.16	+0.3
4,404,187	-		LU632_RS23115	0.16	+0.8
4,404,187	-		LU632_RS23115	0.16	-0.9
4,404,214	-		LU632_RS23115	0.18	-1.9
4,404,237	-		LU632_RS23115	0.20	-0.6
4,404,237	-		LU632_RS23115	0.20	-3.2
4,404,240	+		LU632_RS23115	0.20	+0.3
4,404,240	+		LU632_RS23115	0.20	-0.4
4,404,248	+		LU632_RS23115	0.21	+0.8
4,404,249	-		LU632_RS23115	0.21	-1.2
4,404,329	+		LU632_RS23115	0.27	-0.5
4,404,523	-		LU632_RS23115	0.42	+1.1
4,404,523	-		LU632_RS23115	0.42	+0.3
4,404,566	+		LU632_RS23115	0.45	+0.2
4,404,665	+		LU632_RS23115	0.52	-0.2
4,404,724	-		LU632_RS23115	0.57	+1.2
4,404,801	+		LU632_RS23115	0.63	-1.2
4,404,802	-		LU632_RS23115	0.63	+0.4
4,404,878	+		LU632_RS23115	0.68	-0.0