Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22500

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
4,297,781	+	trkA	LU632_RS22485	0.87	-1.3
4,297,782	-	trkA	LU632_RS22485	0.87	-0.4
4,297,800	-	trkA	LU632_RS22485	0.89	-1.0
4,297,805	+	trkA	LU632_RS22485	0.89	+0.2
4,297,835	-				-1.7
4,297,835	-				-1.8
4,297,848	-				-0.2
4,297,959	-				-1.3
4,297,968	+				-1.2
4,298,075	-				-0.8
4,298,075	-				+0.8
4,298,075	-				+1.3
4,298,398	-				+1.7
4,298,398	-				+0.9
4,298,787	+				+3.9
4,298,907	-		LU632_RS22500	0.20	-0.1
4,299,013	+		LU632_RS22500	0.34	-0.8
4,299,045	+		LU632_RS22500	0.38	+1.2
4,299,130	-		LU632_RS22500	0.49	-2.5
4,299,130	-		LU632_RS22500	0.49	-1.9
4,299,207	+		LU632_RS22500	0.58	-0.1
4,299,234	+		LU632_RS22500	0.62	+1.3
4,299,234	+		LU632_RS22500	0.62	-0.2
4,299,235	-		LU632_RS22500	0.62	-0.9
4,299,235	-		LU632_RS22500	0.62	+0.0
4,299,305	+		LU632_RS22500	0.71	+1.6
4,299,448	+		LU632_RS22500	0.89	-0.0
4,299,448	+		LU632_RS22500	0.89	-0.2
4,299,449	-		LU632_RS22500	0.89	+1.2
4,299,456	-				-0.3
4,299,556	+				+0.1
4,299,557	-				-1.5
4,299,557	-				-2.7
4,299,579	-				+0.3
4,299,601	+				-0.6
4,299,611	+				+0.5
4,299,611	+				-0.4
4,299,611	+				-0.3
4,299,612	-				-0.9
4,299,620	-				+1.9
4,299,639	-				+0.2
4,299,646	-				-0.8
4,299,689	+				-0.7
4,299,718	+				-0.4
4,299,718	+				+0.7
4,299,799	+				+0.2
4,299,799	+				+1.1
4,299,800	-				-1.2