Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20725
Experiment: plant=Melon; plant sample=M2; plant location=P2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | plant=Melon; plant sample=M2; plant location=P2 |
---|---|---|---|---|---|
remove | |||||
3,952,281 | + | -1.2 | |||
3,952,347 | + | -1.2 | |||
3,952,374 | + | -2.1 | |||
3,954,423 | + | -2.4 | |||
3,954,423 | + | -0.7 | |||
3,954,668 | + | -0.8 | |||
3,954,673 | - | +1.9 | |||
3,954,704 | + | +0.5 | |||
3,954,759 | + | -0.4 | |||
3,954,760 | - | +0.9 | |||
3,954,760 | - | +0.7 | |||
3,954,815 | - | +1.9 | |||
3,954,815 | - | -0.1 | |||
3,954,830 | - | +0.1 |
Or see this region's nucleotide sequence