Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20025

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,809,637	+				+0.1
3,809,691	-				-0.6
3,809,694	+				-0.9
3,809,697	+				+0.8
3,809,698	-				-1.0
3,809,720	+				-0.3
3,809,729	+				-1.5
3,809,806	+				-0.7
3,809,807	-				+2.6
3,809,807	-				+1.3
3,810,303	-				+1.2
3,810,331	+				-0.8
3,810,331	+				+0.3
3,810,332	-				-1.1
3,810,473	+		LU632_RS20020	0.62	-0.9
3,810,473	+		LU632_RS20020	0.62	+1.4
3,810,474	-		LU632_RS20020	0.62	-0.9
3,810,499	+		LU632_RS20020	0.73	-0.2
3,810,500	-		LU632_RS20020	0.74	-1.7
3,812,521	+		LU632_RS20035	0.20	-2.1
3,812,522	+		LU632_RS20035	0.20	-0.7
3,812,522	-		LU632_RS20035	0.20	-1.0
3,812,596	+		LU632_RS20035	0.27	+0.2
3,812,659	+		LU632_RS20035	0.33	-0.1
3,812,701	+		LU632_RS20035	0.37	-1.7
3,812,702	-		LU632_RS20035	0.37	-0.9
3,812,702	-		LU632_RS20035	0.37	+0.0
3,812,702	-		LU632_RS20035	0.37	-0.7
3,812,745	+		LU632_RS20035	0.41	-0.4
3,812,756	-		LU632_RS20035	0.42	-0.2
3,812,756	-		LU632_RS20035	0.42	-1.6
3,812,782	+		LU632_RS20035	0.45	-1.0
3,812,786	+		LU632_RS20035	0.45	+0.7
3,812,786	+		LU632_RS20035	0.45	-0.0
3,812,786	+		LU632_RS20035	0.45	+0.2
3,812,786	+		LU632_RS20035	0.45	+0.7
3,812,787	-		LU632_RS20035	0.45	+6.0
3,812,794	+		LU632_RS20035	0.46	-0.3
3,812,794	+		LU632_RS20035	0.46	+0.7
3,812,795	-		LU632_RS20035	0.46	+1.1