Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19815

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,766,358	-	gmhB	LU632_RS19815	0.18	-0.7
3,766,446	+	gmhB	LU632_RS19815	0.34	+0.2
3,766,725	+	gmhB	LU632_RS19815	0.83	-0.8
3,766,771	+				+0.5
3,766,860	+				+0.2
3,766,872	-				-0.4
3,766,888	+				-0.0
3,766,988	+				+1.8
3,767,004	-				-1.3
3,767,060	+				-1.1
3,767,138	+	metN	LU632_RS19820	0.13	+1.9
3,767,141	+	metN	LU632_RS19820	0.14	+0.4
3,767,141	+	metN	LU632_RS19820	0.14	+0.0
3,767,141	+	metN	LU632_RS19820	0.14	+0.2
3,767,194	-	metN	LU632_RS19820	0.19	-2.2
3,767,223	+	metN	LU632_RS19820	0.22	-1.6
3,767,223	+	metN	LU632_RS19820	0.22	-1.4
3,767,279	+	metN	LU632_RS19820	0.27	-1.0
3,767,351	-	metN	LU632_RS19820	0.34	-1.5
3,767,372	+	metN	LU632_RS19820	0.36	+0.8
3,767,470	-	metN	LU632_RS19820	0.46	-1.1
3,767,475	+	metN	LU632_RS19820	0.46	-0.3
3,767,484	-	metN	LU632_RS19820	0.47	-1.0
3,767,533	-	metN	LU632_RS19820	0.52	-1.4
3,767,556	-	metN	LU632_RS19820	0.54	+0.2
3,767,571	+	metN	LU632_RS19820	0.55	-0.2
3,767,572	-	metN	LU632_RS19820	0.56	-1.0
3,767,573	+	metN	LU632_RS19820	0.56	-1.0
3,767,640	+	metN	LU632_RS19820	0.62	-0.6
3,767,640	+	metN	LU632_RS19820	0.62	-1.0
3,767,641	-	metN	LU632_RS19820	0.62	-1.0
3,767,641	-	metN	LU632_RS19820	0.62	-0.8
3,767,755	+	metN	LU632_RS19820	0.73	+0.0
3,767,805	-	metN	LU632_RS19820	0.78	+0.8