Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18115

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,422,511	+	recR	LU632_RS18105	0.23	-0.9
3,422,511	+	recR	LU632_RS18105	0.23	+0.1
3,422,511	+	recR	LU632_RS18105	0.23	+0.8
3,422,511	+	recR	LU632_RS18105	0.23	+0.8
3,422,512	-	recR	LU632_RS18105	0.23	+1.2
3,422,512	-	recR	LU632_RS18105	0.23	-0.1
3,422,512	-	recR	LU632_RS18105	0.23	+0.7
3,422,516	-	recR	LU632_RS18105	0.24	+3.1
3,422,665	-	recR	LU632_RS18105	0.48	-0.2
3,422,768	-	recR	LU632_RS18105	0.65	+0.1
3,423,236	-		LU632_RS18110	0.78	+0.2
3,423,306	+				-0.0
3,423,306	+				-3.5
3,423,307	-				-0.1
3,423,307	-				+1.1
3,423,307	-				-1.2
3,425,706	+				-0.3
3,425,756	-				+0.1
3,426,046	+		LU632_RS18120	0.61	-0.3
3,426,046	+		LU632_RS18120	0.61	-0.8
3,426,092	+		LU632_RS18120	0.79	-1.0
3,426,093	-		LU632_RS18120	0.79	-4.7
3,426,216	+		LU632_RS18125	0.25	+0.5
3,426,216	+		LU632_RS18125	0.25	-0.7
3,426,216	+		LU632_RS18125	0.25	-2.0
3,426,216	+		LU632_RS18125	0.25	-0.5
3,426,216	+		LU632_RS18125	0.25	+0.2
3,426,216	+		LU632_RS18125	0.25	+1.1
3,426,216	+		LU632_RS18125	0.25	+0.2
3,426,217	-		LU632_RS18125	0.25	+0.8
3,426,217	-		LU632_RS18125	0.25	-1.0
3,426,217	-		LU632_RS18125	0.25	+0.4