Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17630

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,312,244	+				+1.5
3,312,245	-				+1.4
3,312,248	+				+0.6
3,312,310	+				+0.1
3,312,335	+				-2.2
3,312,336	-				+1.0
3,312,374	+				+1.2
3,312,375	-				+0.0
3,312,375	-				+1.9
3,312,526	-				-1.7
3,312,624	+		LU632_RS17630	0.15	-0.1
3,312,683	-		LU632_RS17630	0.20	+2.3
3,312,806	-		LU632_RS17630	0.30	+0.3
3,312,806	-		LU632_RS17630	0.30	-0.5
3,312,844	-		LU632_RS17630	0.33	+0.4
3,312,862	+		LU632_RS17630	0.34	+1.5
3,312,863	-		LU632_RS17630	0.34	+0.7
3,312,907	-		LU632_RS17630	0.38	+2.3
3,312,951	+		LU632_RS17630	0.41	+0.1
3,312,989	-		LU632_RS17630	0.44	-0.6
3,313,002	+		LU632_RS17630	0.45	-0.9
3,313,158	+		LU632_RS17630	0.57	+0.6
3,313,158	+		LU632_RS17630	0.57	+0.3
3,313,158	+		LU632_RS17630	0.57	+2.0
3,313,159	-		LU632_RS17630	0.57	-1.3
3,313,159	-		LU632_RS17630	0.57	+0.6
3,313,270	+		LU632_RS17630	0.66	-0.1
3,313,341	-		LU632_RS17630	0.72	+0.0
3,313,341	-		LU632_RS17630	0.72	+1.1
3,313,405	+		LU632_RS17630	0.77	-0.5
3,313,519	+		LU632_RS17630	0.86	-1.9
3,313,519	+		LU632_RS17630	0.86	+1.9
3,313,547	+		LU632_RS17630	0.88	-0.3
3,313,547	+		LU632_RS17630	0.88	+0.1
3,313,548	-		LU632_RS17630	0.88	-0.8
3,313,605	-				+1.0
3,313,608	+				+2.2
3,313,608	+				-0.2
3,313,608	+				+1.5
3,313,609	-				-1.1
3,313,656	+				+0.1
3,313,684	-				-1.3
3,313,684	-				+1.5
3,313,688	-				-0.9
3,313,688	-				-0.8
3,314,547	+				-0.6
3,314,547	+				-1.1