Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17280

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,245,385	+				+0.7
3,245,385	+				+0.4
3,245,386	-				-0.8
3,245,440	+				-1.5
3,245,440	+				+0.2
3,245,440	+				+2.5
3,245,441	-				+1.7
3,245,449	+				+0.5
3,245,449	+				-1.4
3,245,449	+				-0.9
3,245,449	+				+0.6
3,245,450	-				+1.3
3,245,450	-				-1.4
3,245,450	-				-1.0
3,245,547	+				-0.3
3,245,547	+				-1.1
3,245,548	-				-0.8
3,245,548	-				+0.2
3,245,569	-	fghA	LU632_RS17275	0.12	+0.9
3,245,700	-	fghA	LU632_RS17275	0.28	+1.7
3,245,751	+	fghA	LU632_RS17275	0.34	-0.1
3,245,752	-	fghA	LU632_RS17275	0.34	-0.6
3,245,752	-	fghA	LU632_RS17275	0.34	+1.3
3,245,755	+	fghA	LU632_RS17275	0.35	-1.5
3,245,756	-	fghA	LU632_RS17275	0.35	+0.2
3,245,782	+	fghA	LU632_RS17275	0.38	+0.1
3,245,788	-	fghA	LU632_RS17275	0.38	-1.7
3,245,827	+	fghA	LU632_RS17275	0.43	+0.3
3,245,827	+	fghA	LU632_RS17275	0.43	-1.4
3,245,827	+	fghA	LU632_RS17275	0.43	+0.4
3,245,827	+	fghA	LU632_RS17275	0.43	+0.3
3,245,827	+	fghA	LU632_RS17275	0.43	+0.3
3,245,827	+	fghA	LU632_RS17275	0.43	+0.7
3,245,827	+	fghA	LU632_RS17275	0.43	-0.8
3,245,827	+	fghA	LU632_RS17275	0.43	+1.9
3,245,828	-	fghA	LU632_RS17275	0.43	-0.2
3,245,828	-	fghA	LU632_RS17275	0.43	+1.2
3,245,828	-	fghA	LU632_RS17275	0.43	-0.8
3,245,828	-	fghA	LU632_RS17275	0.43	-1.0
3,245,828	-	fghA	LU632_RS17275	0.43	+0.4
3,245,828	-	fghA	LU632_RS17275	0.43	-1.8
3,245,828	-	fghA	LU632_RS17275	0.43	-0.3
3,245,828	-	fghA	LU632_RS17275	0.43	+0.7
3,245,828	-	fghA	LU632_RS17275	0.43	+1.2
3,245,834	-	fghA	LU632_RS17275	0.44	+0.7
3,246,005	+	fghA	LU632_RS17275	0.64	+1.1
3,246,035	-	fghA	LU632_RS17275	0.68	+0.4
3,246,068	-	fghA	LU632_RS17275	0.72	+1.7
3,246,113	+	fghA	LU632_RS17275	0.77	-0.4
3,246,117	+	fghA	LU632_RS17275	0.77	-0.6
3,246,117	+	fghA	LU632_RS17275	0.77	-0.4
3,246,118	-	fghA	LU632_RS17275	0.78	-0.1
3,246,212	+	fghA	LU632_RS17275	0.89	-1.0
3,246,213	-	fghA	LU632_RS17275	0.89	+0.7
3,246,213	-	fghA	LU632_RS17275	0.89	-0.3
3,246,213	-	fghA	LU632_RS17275	0.89	-0.7
3,246,213	-	fghA	LU632_RS17275	0.89	-0.3
3,246,242	-				+0.2
3,246,435	-		LU632_RS17280	0.11	-0.7
3,246,514	+		LU632_RS17280	0.21	-1.4
3,246,514	+		LU632_RS17280	0.21	+2.1
3,246,514	+		LU632_RS17280	0.21	-1.1
3,246,514	+		LU632_RS17280	0.21	+0.6
3,246,515	-		LU632_RS17280	0.21	-2.4
3,246,515	-		LU632_RS17280	0.21	-0.7
3,246,516	+		LU632_RS17280	0.21	+0.7
3,246,516	+		LU632_RS17280	0.21	-1.4
3,246,517	-		LU632_RS17280	0.21	-1.4
3,246,517	-		LU632_RS17280	0.21	-1.8
3,246,517	-		LU632_RS17280	0.21	+0.9
3,246,540	+		LU632_RS17280	0.24	+0.4
3,246,573	+		LU632_RS17280	0.28	-2.5
3,247,161	-				-0.4
3,247,161	-				+0.7
3,247,164	-				-1.0
3,247,298	-		LU632_RS17285	0.15	+1.4
3,247,437	+		LU632_RS17285	0.28	-0.1
3,247,437	+		LU632_RS17285	0.28	+0.7
3,247,437	+		LU632_RS17285	0.28	-1.7
3,247,438	-		LU632_RS17285	0.28	+0.7
3,247,438	-		LU632_RS17285	0.28	+1.5
3,247,443	+		LU632_RS17285	0.29	+1.0
3,247,527	+		LU632_RS17285	0.36	-0.6
3,247,738	-		LU632_RS17285	0.56	+1.7
3,247,810	-		LU632_RS17285	0.62	+0.4
3,247,810	-		LU632_RS17285	0.62	+1.7
3,247,868	+		LU632_RS17285	0.68	-0.3
3,247,898	+		LU632_RS17285	0.71	-0.4
3,248,115	+				+0.4