Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16330

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,089,739	+				+1.3
3,089,804	+		LU632_RS16330	0.15	-1.8
3,089,937	+		LU632_RS16330	0.43	+0.1
3,089,938	-		LU632_RS16330	0.43	-1.0
3,090,105	+		LU632_RS16330	0.77	+1.9
3,090,106	-		LU632_RS16330	0.78	-0.6
3,090,106	-		LU632_RS16330	0.78	-1.1
3,090,106	-		LU632_RS16330	0.78	+1.3
3,090,106	-		LU632_RS16330	0.78	+0.7
3,090,106	-		LU632_RS16330	0.78	+0.8
3,090,139	-		LU632_RS16330	0.84	+1.7
3,090,157	-		LU632_RS16330	0.88	-1.5
3,090,182	-				-0.9
3,090,195	+				+0.8
3,090,195	-				+1.7
3,090,195	-				-0.6
3,090,215	-				-0.3
3,090,215	-				-1.3
3,090,215	-				-1.3
3,090,301	+				+0.3
3,090,371	+				-0.3
3,090,371	+				+0.0
3,090,371	+				-0.6