Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16325

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
3,087,183	+				+0.6
3,087,187	+				-0.1
3,087,187	+				-1.8
3,087,329	+	corC	LU632_RS16320	0.13	-1.1
3,087,335	+	corC	LU632_RS16320	0.13	-0.3
3,087,561	+	corC	LU632_RS16320	0.39	+1.1
3,087,581	+	corC	LU632_RS16320	0.41	+0.7
3,087,581	+	corC	LU632_RS16320	0.41	+0.4
3,087,615	+	corC	LU632_RS16320	0.45	+1.8
3,087,615	+	corC	LU632_RS16320	0.45	+1.5
3,087,708	+	corC	LU632_RS16320	0.56	+2.5
3,087,722	+	corC	LU632_RS16320	0.57	+0.2
3,087,802	+	corC	LU632_RS16320	0.67	-0.8
3,087,850	+	corC	LU632_RS16320	0.72	-1.7
3,087,852	+	corC	LU632_RS16320	0.72	-0.1
3,087,930	+	corC	LU632_RS16320	0.81	+0.2
3,087,930	+	corC	LU632_RS16320	0.81	+0.9
3,087,930	+	corC	LU632_RS16320	0.81	+0.1
3,088,035	+				-0.6
3,088,038	+				-3.1
3,088,038	+				+0.2
3,088,040	+				-2.0
3,089,739	+				+1.3
3,089,804	+		LU632_RS16330	0.15	-1.8
3,089,937	+		LU632_RS16330	0.43	+0.1
3,089,938	-		LU632_RS16330	0.43	-1.0
3,090,105	+		LU632_RS16330	0.77	+1.9
3,090,106	-		LU632_RS16330	0.78	-0.6
3,090,106	-		LU632_RS16330	0.78	-1.1
3,090,106	-		LU632_RS16330	0.78	+1.3
3,090,106	-		LU632_RS16330	0.78	+0.7
3,090,106	-		LU632_RS16330	0.78	+0.8
3,090,139	-		LU632_RS16330	0.84	+1.7
3,090,157	-		LU632_RS16330	0.88	-1.5
3,090,182	-				-0.9
3,090,195	+				+0.8
3,090,195	-				+1.7
3,090,195	-				-0.6
3,090,215	-				-0.3
3,090,215	-				-1.3
3,090,215	-				-1.3
3,090,301	+				+0.3
3,090,371	+				-0.3
3,090,371	+				+0.0
3,090,371	+				-0.6