Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15055

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
2,855,642	+		LU632_RS15040	0.60	-1.2
2,855,842	+				-2.4
2,855,875	-				-0.2
2,855,908	+				-1.0
2,855,908	+				-0.3
2,856,076	+		LU632_RS15045	0.47	+1.6
2,856,077	-		LU632_RS15045	0.47	-1.6
2,856,089	+		LU632_RS15045	0.50	-1.0
2,856,090	-		LU632_RS15045	0.51	+1.6
2,856,111	+		LU632_RS15045	0.56	-0.7
2,856,187	-		LU632_RS15045	0.75	-0.2
2,856,568	+		LU632_RS15050	0.79	-0.1
2,856,569	-		LU632_RS15050	0.79	+0.2
2,856,582	-		LU632_RS15050	0.83	+1.7
2,856,595	+		LU632_RS15050	0.86	-0.4
2,856,652	+				-2.0
2,856,652	+				-0.9
2,856,652	+				+2.0
2,856,653	-				+1.1
2,856,653	-				-1.2
2,856,653	-				+0.5
2,856,654	+				+0.0
2,856,654	+				-0.9
2,856,655	-				-1.9
2,856,752	+		LU632_RS15055	0.38	-0.1
2,856,769	+		LU632_RS15055	0.44	+0.9
2,856,770	-		LU632_RS15055	0.44	-0.7
2,856,770	-		LU632_RS15055	0.44	-0.4
2,856,770	-		LU632_RS15055	0.44	+2.8
2,856,782	-		LU632_RS15055	0.48	-0.7
2,856,805	+		LU632_RS15055	0.56	+1.5
2,856,890	+		LU632_RS15055	0.85	+0.6
2,856,890	+		LU632_RS15055	0.85	+0.6
2,856,890	+		LU632_RS15055	0.85	-0.6
2,856,891	-		LU632_RS15055	0.85	+1.1
2,856,891	-		LU632_RS15055	0.85	-0.2
2,856,891	-		LU632_RS15055	0.85	-0.3
2,856,892	+		LU632_RS15055	0.85	-0.1
2,856,923	+				+0.7
2,856,923	+				+1.7
2,856,947	-				-0.4
2,856,960	-				+0.6
2,856,960	-				-0.1
2,856,960	-				+2.8
2,856,960	-				-1.2
2,857,106	-				-1.0
2,857,106	-				+0.8
2,857,141	+				-0.8
2,857,143	+				-0.4
2,857,158	-				+0.0
2,857,224	+				+0.0
2,857,225	-				-3.3
2,857,304	+				+0.1
2,857,304	+				-0.1
2,857,354	+				-1.4
2,857,355	-				-2.3
2,857,361	-				-1.2
2,857,371	-				+0.2