Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14905

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
2,834,570	-		LU632_RS14895	0.88	-0.0
2,834,570	-		LU632_RS14895	0.88	-0.0
2,834,570	-		LU632_RS14895	0.88	-1.4
2,834,570	-		LU632_RS14895	0.88	-2.0
2,835,267	+				-2.0
2,836,023	+				+1.2
2,836,100	+				-1.2
2,836,134	+		LU632_RS14910	0.14	+0.9
2,836,134	+		LU632_RS14910	0.14	-1.3
2,836,134	+		LU632_RS14910	0.14	-0.0
2,836,135	-		LU632_RS14910	0.14	+0.0
2,836,135	-		LU632_RS14910	0.14	-0.7
2,836,136	+		LU632_RS14910	0.14	-0.7
2,836,154	+		LU632_RS14910	0.17	-0.7
2,836,209	-		LU632_RS14910	0.26	+1.2
2,836,295	-		LU632_RS14910	0.39	+2.6
2,836,361	+		LU632_RS14910	0.50	+0.5
2,836,366	-		LU632_RS14910	0.50	+0.6
2,836,368	-		LU632_RS14910	0.51	-0.5
2,836,393	+		LU632_RS14910	0.55	-1.6
2,836,394	-		LU632_RS14910	0.55	+0.6
2,836,414	-		LU632_RS14910	0.58	+0.8
2,836,420	-		LU632_RS14910	0.59	+0.1
2,836,429	+		LU632_RS14910	0.60	+0.5
2,836,429	+		LU632_RS14910	0.60	-1.2
2,836,429	+		LU632_RS14910	0.60	-1.1
2,836,429	+		LU632_RS14910	0.60	+0.6
2,836,430	-		LU632_RS14910	0.60	-1.2
2,836,430	-		LU632_RS14910	0.60	+2.5
2,836,430	-		LU632_RS14910	0.60	-1.7
2,836,430	-		LU632_RS14910	0.60	+1.9
2,836,608	+		LU632_RS14910	0.88	+0.3
2,836,608	+		LU632_RS14910	0.88	+1.1
2,836,629	+				-0.2
2,836,629	+				+0.1
2,836,630	-				-0.7
2,836,662	+				+1.9
2,836,772	+				+0.1
2,836,772	+				+1.6
2,836,773	-				-0.2
2,836,773	-				+0.2
2,836,958	-		LU632_RS14915	0.65	-0.4
2,836,958	-		LU632_RS14915	0.65	+1.2