Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14455

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
2,754,341	+		LU632_RS14450	0.44	-0.7
2,754,357	+		LU632_RS14450	0.45	-1.0
2,754,358	-		LU632_RS14450	0.45	-0.0
2,754,360	+		LU632_RS14450	0.45	+0.6
2,754,360	+		LU632_RS14450	0.45	+0.8
2,754,361	-		LU632_RS14450	0.45	+0.6
2,754,405	-		LU632_RS14450	0.48	-0.0
2,754,429	+		LU632_RS14450	0.49	+0.6
2,754,618	+		LU632_RS14450	0.60	+1.2
2,754,619	-		LU632_RS14450	0.60	+1.1
2,754,980	-		LU632_RS14450	0.81	-0.0
2,755,173	+				+1.3
2,755,227	+				-0.9
2,755,228	-				+0.4
2,755,291	-				-0.3
2,755,480	+		LU632_RS14455	0.21	-1.2
2,755,481	-		LU632_RS14455	0.21	-1.6
2,755,490	+		LU632_RS14455	0.22	+0.8
2,755,519	+		LU632_RS14455	0.25	+0.6
2,755,520	-		LU632_RS14455	0.25	+1.2
2,755,579	+		LU632_RS14455	0.32	+0.7
2,755,620	+		LU632_RS14455	0.37	+0.6
2,755,621	-		LU632_RS14455	0.37	-0.7
2,755,621	-		LU632_RS14455	0.37	-0.4
2,755,648	+		LU632_RS14455	0.40	-1.4
2,755,656	-		LU632_RS14455	0.41	+3.1
2,755,663	+		LU632_RS14455	0.41	+0.6
2,755,664	-		LU632_RS14455	0.42	-0.2
2,755,762	+		LU632_RS14455	0.53	-2.7
2,755,763	-		LU632_RS14455	0.53	-1.9
2,755,854	+		LU632_RS14455	0.63	+0.1
2,755,855	-		LU632_RS14455	0.63	+1.6
2,755,864	+		LU632_RS14455	0.64	-2.5
2,755,865	-		LU632_RS14455	0.64	+1.2
2,755,985	-		LU632_RS14455	0.78	-1.8
2,755,997	-		LU632_RS14455	0.79	+1.6
2,755,997	-		LU632_RS14455	0.79	+4.4
2,755,997	-		LU632_RS14455	0.79	-2.1
2,755,999	-		LU632_RS14455	0.79	+0.4
2,756,153	+				+2.6
2,756,154	-				+2.7
2,756,164	+				+0.3
2,756,165	-				-2.1
2,756,165	-				+0.9
2,756,166	+				+1.6
2,756,166	+				+0.5
2,756,166	+				+0.8
2,756,166	+				-0.4
2,756,167	-				+0.1
2,756,167	-				-1.9
2,756,369	+		LU632_RS14460	0.26	-1.1
2,756,407	+		LU632_RS14460	0.31	+1.0
2,756,408	+		LU632_RS14460	0.31	-1.5
2,756,452	+		LU632_RS14460	0.37	+3.5
2,756,452	+		LU632_RS14460	0.37	+1.0
2,756,494	+		LU632_RS14460	0.43	-1.2