Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11260

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
2,152,324	+				+0.4
2,152,324	+				-1.0
2,152,324	+				-0.3
2,152,324	+				+0.5
2,152,325	-				-1.7
2,152,329	-				-0.1
2,153,152	+				-1.2
2,153,152	+				-0.1
2,153,154	+				-0.1
2,154,515	+				+0.8
2,154,515	+				+1.4
2,154,563	+				-0.4
2,154,563	+				-0.2
2,154,563	+				+0.2
2,154,603	+				+0.6
2,154,671	-	pdxY	LU632_RS11265	0.12	+0.1
2,154,702	+	pdxY	LU632_RS11265	0.15	+1.1
2,154,863	+	pdxY	LU632_RS11265	0.33	-1.0
2,154,930	-	pdxY	LU632_RS11265	0.41	-0.1
2,155,088	+	pdxY	LU632_RS11265	0.58	+0.4
2,155,253	+	pdxY	LU632_RS11265	0.76	+1.3
2,155,294	-	pdxY	LU632_RS11265	0.81	+1.1
2,155,314	+	pdxY	LU632_RS11265	0.83	-0.1
2,155,315	-	pdxY	LU632_RS11265	0.83	+0.7
2,155,343	-	pdxY	LU632_RS11265	0.86	-2.3
2,155,397	+				-0.4
2,155,420	+				+0.2
2,155,421	-				+0.3
2,155,436	+				-0.5
2,155,462	+				-0.4
2,155,496	+				-1.7