Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10855

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
2,070,725	+		LU632_RS10850	0.30	+1.1
2,070,737	-		LU632_RS10850	0.31	-0.7
2,070,761	+		LU632_RS10850	0.33	-0.8
2,070,762	-		LU632_RS10850	0.33	+0.7
2,070,762	-		LU632_RS10850	0.33	-1.7
2,070,801	+		LU632_RS10850	0.37	-0.0
2,070,873	+		LU632_RS10850	0.43	+0.1
2,070,874	-		LU632_RS10850	0.43	+0.5
2,070,874	-		LU632_RS10850	0.43	+3.2
2,071,111	+		LU632_RS10850	0.63	-0.3
2,071,128	+		LU632_RS10850	0.65	-0.4
2,071,131	+		LU632_RS10850	0.65	+0.8
2,071,132	-		LU632_RS10850	0.65	-3.5
2,071,261	+		LU632_RS10850	0.76	+0.3
2,071,306	+		LU632_RS10850	0.80	+1.6
2,071,308	+		LU632_RS10850	0.80	+2.1
2,071,308	+		LU632_RS10850	0.80	-0.1
2,071,308	+		LU632_RS10850	0.80	-1.6
2,071,309	-		LU632_RS10850	0.80	-0.1
2,071,309	-		LU632_RS10850	0.80	+0.3
2,071,571	+				+0.8
2,071,572	-				+1.2
2,071,572	-				+0.6
2,071,608	+				-1.5
2,071,610	+				-1.3
2,071,610	+				-0.2
2,071,610	+				-0.2
2,071,629	-				-0.3
2,071,698	+				+1.2
2,071,698	+				+0.8
2,071,699	-				-0.3
2,071,707	-				-1.0
2,071,711	+				-1.7
2,071,770	+				+1.5
2,071,825	+				-0.5
2,071,850	+				+0.1
2,072,022	+		LU632_RS10855	0.22	-1.5
2,072,023	-		LU632_RS10855	0.22	-0.5
2,072,061	+		LU632_RS10855	0.25	-1.1
2,072,067	-		LU632_RS10855	0.25	-1.5
2,072,232	+		LU632_RS10855	0.37	+1.5
2,072,295	+		LU632_RS10855	0.41	+1.1
2,072,313	-		LU632_RS10855	0.43	-0.8
2,072,393	-		LU632_RS10855	0.48	-0.6
2,072,425	+		LU632_RS10855	0.51	-1.1
2,072,453	-		LU632_RS10855	0.53	+0.5
2,072,491	-		LU632_RS10855	0.55	+0.2
2,072,550	+		LU632_RS10855	0.60	-2.4
2,072,553	+		LU632_RS10855	0.60	+0.5
2,072,598	+		LU632_RS10855	0.63	-0.7
2,072,654	+		LU632_RS10855	0.67	+0.5
2,072,654	+		LU632_RS10855	0.67	-0.5
2,072,790	+		LU632_RS10855	0.77	-0.9
2,072,919	+		LU632_RS10855	0.86	+0.5
2,072,963	+		LU632_RS10855	0.89	-0.5
2,073,082	+				-0.5
2,073,082	+				+0.6
2,073,082	+				+1.1
2,073,166	+				-1.4
2,073,190	+				-0.6
2,073,191	-				+1.0
2,073,228	-				-0.7
2,073,228	-				+0.7
2,073,228	-				-0.7
2,073,228	-				-0.2
2,073,229	+				+1.9
2,073,229	+				+0.2
2,073,229	+				+0.2
2,073,229	+				+1.2
2,073,229	+				+1.5
2,073,230	-				+0.0
2,073,232	-				+0.2
2,073,232	-				-0.0
2,073,232	-				-2.2
2,073,297	+				+0.1
2,073,333	+				+1.3
2,073,334	-				-2.3
2,073,334	-				+0.4
2,073,334	-				-0.8
2,073,511	-		LU632_RS10860	0.40	-0.1
2,073,516	-		LU632_RS10860	0.41	-0.8
2,073,527	+		LU632_RS10860	0.42	-1.6
2,073,767	+		LU632_RS10860	0.83	+2.3
2,073,801	-		LU632_RS10860	0.89	+0.5
2,073,866	+				-0.2
2,073,870	+				+1.7
2,073,870	+				-3.0
2,073,871	-				-0.3
2,073,871	-				+0.0
2,073,871	-				+1.5
2,073,871	-				-0.7
2,073,926	+				+0.3
2,074,005	+				+0.8
2,074,006	-				-1.7