Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10760

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
2,050,537	+				+0.5
2,050,537	+				-0.4
2,050,537	+				+1.5
2,050,653	+		LU632_RS10755	0.24	-0.5
2,050,654	-		LU632_RS10755	0.24	+0.9
2,050,714	+		LU632_RS10755	0.36	+0.4
2,050,816	+		LU632_RS10755	0.58	+0.5
2,050,925	-		LU632_RS10755	0.80	-2.1
2,050,925	-		LU632_RS10755	0.80	-0.7
2,050,932	+		LU632_RS10755	0.82	+0.3
2,050,933	-		LU632_RS10755	0.82	+0.2
2,050,946	-		LU632_RS10755	0.84	-2.3
2,051,066	+				+1.5
2,051,106	+				-1.6
2,051,106	+				-1.1
2,051,107	-				-1.1
2,051,107	-				-1.4
2,051,109	+				-2.6
2,051,194	-	chaA	LU632_RS10760	0.17	-1.6
2,051,259	+	chaA	LU632_RS10760	0.23	+0.9
2,051,260	-	chaA	LU632_RS10760	0.23	+3.7
2,051,367	+	chaA	LU632_RS10760	0.33	-1.1
2,051,368	-	chaA	LU632_RS10760	0.33	-0.3
2,051,368	-	chaA	LU632_RS10760	0.33	-0.4
2,051,424	+	chaA	LU632_RS10760	0.38	-2.5
2,051,424	+	chaA	LU632_RS10760	0.38	-1.1
2,051,425	-	chaA	LU632_RS10760	0.38	-1.3
2,051,425	-	chaA	LU632_RS10760	0.38	+1.4
2,051,518	-	chaA	LU632_RS10760	0.46	+0.9
2,051,523	+	chaA	LU632_RS10760	0.47	+1.1
2,051,524	-	chaA	LU632_RS10760	0.47	+1.5
2,051,524	-	chaA	LU632_RS10760	0.47	-0.1
2,051,591	+	chaA	LU632_RS10760	0.53	+1.2
2,051,609	+	chaA	LU632_RS10760	0.55	-1.2
2,051,612	+	chaA	LU632_RS10760	0.55	+1.9
2,051,683	+	chaA	LU632_RS10760	0.61	-0.3
2,051,754	+	chaA	LU632_RS10760	0.68	-0.8
2,051,922	+	chaA	LU632_RS10760	0.83	+0.1
2,051,922	+	chaA	LU632_RS10760	0.83	+0.5
2,051,961	+	chaA	LU632_RS10760	0.87	-0.1
2,051,961	+	chaA	LU632_RS10760	0.87	-0.6
2,051,987	+	chaA	LU632_RS10760	0.89	+1.0
2,051,988	-	chaA	LU632_RS10760	0.89	+0.2
2,052,011	+				-0.5
2,052,011	+				+0.4
2,052,011	+				+0.1
2,052,011	+				+1.8
2,052,060	+				+1.8
2,052,061	-				+1.2
2,052,328	+				-0.9
2,052,353	-				+0.2
2,052,564	-				-0.0
2,052,602	+				-1.3
2,052,659	+				-0.6
2,052,659	+				+2.2
2,052,920	+		LU632_RS10765	0.38	-0.1
2,052,984	+		LU632_RS10765	0.48	-1.1
2,052,985	-		LU632_RS10765	0.48	+0.5
2,053,056	+		LU632_RS10765	0.58	-1.3
2,053,079	+		LU632_RS10765	0.62	+4.3
2,053,079	+		LU632_RS10765	0.62	-0.8
2,053,079	+		LU632_RS10765	0.62	+0.8
2,053,103	-		LU632_RS10765	0.65	-1.1