Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10385

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
1,983,927	+				+0.5
1,983,990	+				-0.7
1,983,990	+				+7.5
1,983,990	+				+0.5
1,983,995	+				-0.8
1,983,999	-				-1.1
1,983,999	-				-2.1
1,984,076	+				+1.5
1,984,077	-				-0.0
1,984,157	-				-0.6
1,984,252	-				+1.0
1,984,255	+				+1.5
1,984,302	+				-1.3
1,984,337	-				-1.0
1,984,453	+	flgN	LU632_RS10380	0.31	+2.9
1,984,454	-	flgN	LU632_RS10380	0.31	+1.1
1,984,454	-	flgN	LU632_RS10380	0.31	-2.5
1,984,457	+	flgN	LU632_RS10380	0.32	-1.8
1,984,533	+	flgN	LU632_RS10380	0.50	-1.0
1,984,688	+	flgN	LU632_RS10380	0.85	-1.1
1,984,688	+	flgN	LU632_RS10380	0.85	-1.0
1,984,688	+	flgN	LU632_RS10380	0.85	+0.6
1,985,108	-				-0.2
1,985,170	+				+0.2
1,985,171	-				-1.5
1,985,172	+				-1.9
1,985,172	+				+0.2
1,985,267	-	flgA	LU632_RS10390	0.16	+0.2
1,985,334	+	flgA	LU632_RS10390	0.26	-0.7
1,985,499	+	flgA	LU632_RS10390	0.51	+1.2
1,985,531	+	flgA	LU632_RS10390	0.55	-0.5
1,985,531	+	flgA	LU632_RS10390	0.55	-1.6
1,985,531	+	flgA	LU632_RS10390	0.55	-0.1
1,985,531	+	flgA	LU632_RS10390	0.55	+1.5
1,985,531	+	flgA	LU632_RS10390	0.55	-1.1
1,985,531	+	flgA	LU632_RS10390	0.55	-1.8
1,985,531	+	flgA	LU632_RS10390	0.55	-0.8
1,985,532	-	flgA	LU632_RS10390	0.55	-1.0
1,985,532	-	flgA	LU632_RS10390	0.55	+2.0
1,985,532	-	flgA	LU632_RS10390	0.55	+0.2
1,985,691	+	flgA	LU632_RS10390	0.79	+1.9
1,985,833	-				+1.1
1,985,833	-				-0.1
1,985,947	+				-0.3
1,985,947	+				-0.3