Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS09875

Experiment: plant=Melon; plant sample=M2; plant location=P2

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntmukF and mukE overlap by 20 nucleotidesmukE and mukB overlap by 8 nucleotides LU632_RS09870: mukF - chromosome partition protein MukF, at 1,879,009 to 1,880,331 mukF LU632_RS09875: mukE - chromosome partition protein MukE, at 1,880,312 to 1,881,028 mukE LU632_RS09880: mukB - chromosome partition protein MukB, at 1,881,021 to 1,885,484 mukB Position (kb) 1880 1881 1882Strain fitness (log2 ratio) -1 0 1at 1880.992 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction plant=Melon; plant sample=M2; plant location=P2
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1,880,992 + -0.7

Or see this region's nucleotide sequence