Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08230

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
1,548,501	-				-0.5
1,548,501	-				-2.0
1,548,653	-				+0.2
1,548,685	-				+0.4
1,548,686	+				+0.1
1,549,500	+				+2.3
1,549,504	+				+1.4
1,549,504	+				-0.2
1,549,518	-				+0.8
1,549,610	-		LU632_RS08230	0.36	+1.0
1,549,610	-		LU632_RS08230	0.36	-0.5
1,549,612	-		LU632_RS08230	0.37	+0.9
1,549,634	+		LU632_RS08230	0.44	-2.5
1,549,720	+		LU632_RS08230	0.70	-0.9
1,549,829	-				+3.0
1,549,848	-				+0.9
1,549,967	-				+3.3
1,550,353	+				-0.7
1,550,354	-				-1.8
1,550,354	-				-0.9
1,550,354	-				-1.9
1,550,425	+				+1.1
1,550,566	+		LU632_RS08240	0.44	-1.8
1,550,571	+		LU632_RS08240	0.47	-1.3
1,550,571	+		LU632_RS08240	0.47	-1.1
1,550,572	-		LU632_RS08240	0.48	+1.1
1,550,615	-		LU632_RS08240	0.73	+0.5
1,550,669	+				-1.3
1,550,670	-				+0.7
1,550,729	-				-1.9
1,550,771	-				-1.9