Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06750

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
1,297,909	+		LU632_RS06740	0.27	-0.9
1,298,309	+		LU632_RS06740	0.85	+0.2
1,298,309	+		LU632_RS06740	0.85	+0.8
1,298,309	+		LU632_RS06740	0.85	-1.7
1,298,309	+		LU632_RS06740	0.85	-1.4
1,298,311	+		LU632_RS06740	0.86	+0.7
1,298,311	+		LU632_RS06740	0.86	+0.9
1,298,405	-				-1.1
1,298,405	-				-0.4
1,298,405	-				+0.4
1,298,405	-				+0.6
1,298,405	-				+0.1
1,298,405	-				-0.4
1,298,405	-				+1.4
1,298,409	-				+0.5
1,298,534	-				+0.3
1,298,657	+		LU632_RS06745	0.63	-0.4
1,298,689	+		LU632_RS06745	0.79	+0.1
1,298,695	+		LU632_RS06745	0.83	+1.5
1,298,770	+				+1.7
1,298,770	+				+1.7
1,298,771	-				-0.5
1,298,771	-				-0.3
1,298,872	+				-0.1
1,298,872	+				+1.7
1,298,872	+				-0.1
1,298,873	-				+1.6
1,298,883	-				+0.7
1,298,922	+				-0.8
1,298,923	-				+0.4
1,298,923	-				-0.2
1,298,923	-				+1.1
1,298,923	-				-0.3
1,298,947	+				-0.1
1,299,010	-				-1.1
1,299,010	-				-0.0
1,299,011	+				-2.6
1,299,011	+				-0.8
1,299,012	-				-0.6
1,299,012	-				-1.9
1,299,012	-				-0.1
1,299,012	-				-1.6
1,299,013	+				-0.9
1,299,013	+				-2.7
1,299,014	-				-2.4
1,299,014	-				+0.2
1,299,079	-		LU632_RS06755	0.13	+1.0
1,299,142	+		LU632_RS06755	0.18	+1.1
1,299,142	+		LU632_RS06755	0.18	-0.6
1,299,233	+		LU632_RS06755	0.25	+1.1
1,299,234	-		LU632_RS06755	0.25	+1.1
1,299,245	+		LU632_RS06755	0.26	-0.7
1,299,368	-		LU632_RS06755	0.36	+0.2
1,299,425	-		LU632_RS06755	0.40	+0.7
1,299,460	+		LU632_RS06755	0.43	-0.2
1,299,463	+		LU632_RS06755	0.43	-0.7
1,299,463	+		LU632_RS06755	0.43	+0.9
1,299,482	-		LU632_RS06755	0.45	-2.2
1,299,567	-		LU632_RS06755	0.52	+0.3
1,299,590	+		LU632_RS06755	0.53	+0.2
1,299,590	+		LU632_RS06755	0.53	+0.6
1,299,591	-		LU632_RS06755	0.54	-0.6
1,299,591	-		LU632_RS06755	0.54	+0.3
1,299,591	-		LU632_RS06755	0.54	+0.2
1,299,704	+		LU632_RS06755	0.63	+0.7
1,299,705	-		LU632_RS06755	0.63	-0.3
1,299,787	+		LU632_RS06755	0.69	+2.0
1,299,787	+		LU632_RS06755	0.69	-0.7
1,299,787	+		LU632_RS06755	0.69	-0.9