Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06375

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
1,226,190	-				-1.2
1,226,212	-				+0.4
1,226,275	+				+0.8
1,226,276	-				-0.9
1,226,276	-				+0.1
1,226,303	-				-0.4
1,226,340	-		LU632_RS06375	0.12	-0.8
1,226,388	-		LU632_RS06375	0.17	+0.4
1,226,419	+		LU632_RS06375	0.21	+0.4
1,226,464	+		LU632_RS06375	0.26	+0.9
1,226,464	+		LU632_RS06375	0.26	-0.8
1,226,464	+		LU632_RS06375	0.26	+0.5
1,226,465	-		LU632_RS06375	0.26	+0.7
1,226,496	-		LU632_RS06375	0.30	-1.4
1,226,515	+		LU632_RS06375	0.32	-0.5
1,226,516	-		LU632_RS06375	0.32	+0.6
1,226,528	+		LU632_RS06375	0.34	+2.6
1,226,530	+		LU632_RS06375	0.34	-1.5
1,226,592	-		LU632_RS06375	0.41	-0.3
1,226,622	+		LU632_RS06375	0.45	+1.6
1,226,622	+		LU632_RS06375	0.45	+0.0
1,226,622	+		LU632_RS06375	0.45	-0.5
1,226,622	+		LU632_RS06375	0.45	+0.2
1,226,623	-		LU632_RS06375	0.45	+1.5
1,226,623	-		LU632_RS06375	0.45	+0.8
1,226,624	+		LU632_RS06375	0.45	-0.6
1,226,630	-		LU632_RS06375	0.46	-0.2
1,226,708	-		LU632_RS06375	0.55	+0.2
1,226,708	-		LU632_RS06375	0.55	+0.6
1,226,760	+		LU632_RS06375	0.61	-0.8
1,226,760	+		LU632_RS06375	0.61	+0.3
1,226,761	-		LU632_RS06375	0.61	+5.4
1,226,762	+		LU632_RS06375	0.61	-0.4
1,226,762	+		LU632_RS06375	0.61	+0.2
1,226,763	-		LU632_RS06375	0.61	-0.5
1,226,854	+		LU632_RS06375	0.72	+0.3
1,226,888	+		LU632_RS06375	0.76	-0.5
1,226,998	+		LU632_RS06375	0.89	-0.1
1,227,033	+				-1.2
1,227,034	-				-0.3
1,227,034	-				+0.5
1,227,164	-		LU632_RS06380	0.31	+0.8
1,227,246	-		LU632_RS06380	0.63	-1.2
1,227,268	+		LU632_RS06380	0.72	+0.5
1,227,269	-		LU632_RS06380	0.72	-0.0
1,227,338	-				+1.3
1,227,338	-				-0.4
1,227,398	+				+0.1
1,227,398	+				-0.4
1,227,399	-				+0.1
1,227,432	+				-0.9
1,227,432	+				-0.7
1,227,432	+				-1.5
1,227,432	+				-1.1
1,227,433	-				-0.1
1,227,433	-				-1.4
1,227,466	-		LU632_RS06385	0.11	+0.8
1,227,469	+		LU632_RS06385	0.12	-0.1
1,227,470	-		LU632_RS06385	0.12	-0.6
1,227,470	-		LU632_RS06385	0.12	-0.3
1,227,497	+		LU632_RS06385	0.16	-2.1
1,227,498	-		LU632_RS06385	0.16	-0.3
1,227,498	-		LU632_RS06385	0.16	+1.0
1,227,498	-		LU632_RS06385	0.16	-0.1
1,227,576	+		LU632_RS06385	0.27	+0.8
1,227,625	-		LU632_RS06385	0.35	+0.6
1,227,625	-		LU632_RS06385	0.35	+1.1
1,227,665	+		LU632_RS06385	0.41	-0.2
1,227,746	+		LU632_RS06385	0.53	-0.4
1,227,746	+		LU632_RS06385	0.53	-0.6
1,227,746	+		LU632_RS06385	0.53	+1.6
1,227,747	-		LU632_RS06385	0.53	-0.3
1,227,747	-		LU632_RS06385	0.53	-0.7
1,227,826	+		LU632_RS06385	0.64	+1.1
1,227,840	-		LU632_RS06385	0.66	-1.4
1,227,906	+		LU632_RS06385	0.76	+1.4
1,227,906	+		LU632_RS06385	0.76	+0.2
1,227,906	+		LU632_RS06385	0.76	-0.2
1,227,906	+		LU632_RS06385	0.76	-1.5
1,227,907	-		LU632_RS06385	0.76	-1.6
1,227,909	-		LU632_RS06385	0.77	+0.2
1,227,956	-		LU632_RS06385	0.83	-2.3
1,228,061	+				+0.8
1,228,061	+				+0.1
1,228,061	+				+1.3
1,228,062	-				+1.2
1,228,065	+				+0.5
1,228,065	-				+0.2
1,228,066	-				-1.5
1,228,094	-				+0.8