Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06370

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
1,224,692	+				+1.8
1,226,190	-				-1.2
1,226,212	-				+0.4
1,226,275	+				+0.8
1,226,276	-				-0.9
1,226,276	-				+0.1
1,226,303	-				-0.4
1,226,340	-		LU632_RS06375	0.12	-0.8
1,226,388	-		LU632_RS06375	0.17	+0.4
1,226,419	+		LU632_RS06375	0.21	+0.4
1,226,464	+		LU632_RS06375	0.26	+0.9
1,226,464	+		LU632_RS06375	0.26	-0.8
1,226,464	+		LU632_RS06375	0.26	+0.5
1,226,465	-		LU632_RS06375	0.26	+0.7
1,226,496	-		LU632_RS06375	0.30	-1.4
1,226,515	+		LU632_RS06375	0.32	-0.5
1,226,516	-		LU632_RS06375	0.32	+0.6
1,226,528	+		LU632_RS06375	0.34	+2.6
1,226,530	+		LU632_RS06375	0.34	-1.5
1,226,592	-		LU632_RS06375	0.41	-0.3
1,226,622	+		LU632_RS06375	0.45	+1.6
1,226,622	+		LU632_RS06375	0.45	+0.0
1,226,622	+		LU632_RS06375	0.45	-0.5
1,226,622	+		LU632_RS06375	0.45	+0.2
1,226,623	-		LU632_RS06375	0.45	+1.5
1,226,623	-		LU632_RS06375	0.45	+0.8
1,226,624	+		LU632_RS06375	0.45	-0.6
1,226,630	-		LU632_RS06375	0.46	-0.2
1,226,708	-		LU632_RS06375	0.55	+0.2
1,226,708	-		LU632_RS06375	0.55	+0.6
1,226,760	+		LU632_RS06375	0.61	-0.8
1,226,760	+		LU632_RS06375	0.61	+0.3
1,226,761	-		LU632_RS06375	0.61	+5.4
1,226,762	+		LU632_RS06375	0.61	-0.4
1,226,762	+		LU632_RS06375	0.61	+0.2
1,226,763	-		LU632_RS06375	0.61	-0.5
1,226,854	+		LU632_RS06375	0.72	+0.3
1,226,888	+		LU632_RS06375	0.76	-0.5
1,226,998	+		LU632_RS06375	0.89	-0.1