Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS02715

Experiment: plant=Melon; plant sample=M2; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M2; plant location=P2
544,276	-	djlA	LU632_RS02710	0.16	+0.5
544,400	-	djlA	LU632_RS02710	0.31	+2.2
544,493	+	djlA	LU632_RS02710	0.43	+0.3
544,498	+	djlA	LU632_RS02710	0.43	+0.2
544,498	+	djlA	LU632_RS02710	0.43	+0.5
544,499	-	djlA	LU632_RS02710	0.43	+0.5
544,579	-	djlA	LU632_RS02710	0.53	-0.1
544,623	-	djlA	LU632_RS02710	0.58	+0.8
544,734	-	djlA	LU632_RS02710	0.72	-0.8
544,896	+				+0.5
544,897	-				-1.3
544,964	+				-0.1
544,965	-				+0.6
544,965	-				-0.1
544,965	-				+1.0
544,965	-				-0.1
544,966	+				-0.3
544,966	+				-0.5
544,966	+				+0.7
544,966	-				+0.9
544,966	-				+1.5
544,967	-				+0.1
544,967	-				+0.8
544,967	-				-1.1
544,967	-				+0.1
544,967	-				-0.9
544,967	-				-1.3
544,967	-				+0.8
545,005	+				+0.5
545,021	+				+0.3
545,022	-				-1.9
545,075	+				+1.2
545,075	+				+0.1
545,186	+				+1.8
545,186	+				+1.2
545,186	+				+0.1
545,187	-				-0.6
545,187	-				-0.1
545,187	-				-1.6
545,188	+				-0.2
545,188	+				-1.5
545,212	+				+0.9
547,650	+				+2.4
547,650	+				+0.8