Experiment: plant=Melon; plant sample=M2; plant location=P2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LU632_RS01645 and LU632_RS01650 overlap by 14 nucleotides LU632_RS01650 and LU632_RS01655 overlap by 8 nucleotides LU632_RS01655 and LU632_RS01660 overlap by 11 nucleotides LU632_RS01660 and LU632_RS01665 overlap by 1 nucleotides
LU632_RS01645: LU632_RS01645 - GPW/gp25 family protein, at 325,398 to 325,766
_RS01645
LU632_RS01650: LU632_RS01650 - baseplate J/gp47 family protein, at 325,753 to 326,649
_RS01650
LU632_RS01655: LU632_RS01655 - phage tail protein I, at 326,642 to 327,256
_RS01655
LU632_RS01660: LU632_RS01660 - phage tail protein, at 327,246 to 328,247
_RS01660
LU632_RS01665: LU632_RS01665 - tail fiber assembly protein, at 328,247 to 328,843
_RS01665
Position (kb) 326
327
328 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 325.650 kb on - strand, within LU632_RS01645 at 325.650 kb on - strand, within LU632_RS01645 at 325.652 kb on + strand, within LU632_RS01645 at 325.652 kb on + strand, within LU632_RS01645 at 325.652 kb on + strand, within LU632_RS01645 at 325.653 kb on - strand, within LU632_RS01645 at 325.653 kb on - strand, within LU632_RS01645 at 325.795 kb on - strand at 325.922 kb on + strand, within LU632_RS01650 at 325.923 kb on - strand, within LU632_RS01650 at 326.176 kb on + strand, within LU632_RS01650 at 326.176 kb on + strand, within LU632_RS01650 at 326.177 kb on - strand, within LU632_RS01650 at 326.246 kb on + strand, within LU632_RS01650 at 326.246 kb on + strand, within LU632_RS01650 at 326.246 kb on + strand, within LU632_RS01650 at 326.247 kb on - strand, within LU632_RS01650 at 326.360 kb on + strand, within LU632_RS01650 at 326.360 kb on + strand, within LU632_RS01650 at 326.360 kb on + strand, within LU632_RS01650 at 326.361 kb on - strand, within LU632_RS01650 at 326.383 kb on + strand, within LU632_RS01650 at 326.383 kb on + strand, within LU632_RS01650 at 326.383 kb on + strand, within LU632_RS01650 at 326.384 kb on - strand, within LU632_RS01650 at 326.384 kb on - strand, within LU632_RS01650 at 326.384 kb on - strand, within LU632_RS01650 at 326.384 kb on - strand, within LU632_RS01650 at 326.384 kb on - strand, within LU632_RS01650 at 326.385 kb on + strand, within LU632_RS01650 at 326.385 kb on + strand, within LU632_RS01650 at 326.385 kb on + strand, within LU632_RS01650 at 326.386 kb on - strand, within LU632_RS01650 at 326.386 kb on - strand, within LU632_RS01650 at 326.404 kb on + strand, within LU632_RS01650 at 326.404 kb on + strand, within LU632_RS01650 at 326.405 kb on - strand, within LU632_RS01650 at 326.405 kb on - strand, within LU632_RS01650 at 326.648 kb on - strand at 326.648 kb on - strand at 326.681 kb on - strand at 326.749 kb on + strand, within LU632_RS01655 at 327.179 kb on - strand, within LU632_RS01655 at 327.179 kb on - strand, within LU632_RS01655 at 327.201 kb on - strand at 327.201 kb on - strand at 327.202 kb on + strand at 327.255 kb on - strand at 327.255 kb on - strand at 327.259 kb on - strand at 327.453 kb on - strand, within LU632_RS01660 at 327.464 kb on + strand, within LU632_RS01660 at 327.573 kb on + strand, within LU632_RS01660 at 327.658 kb on + strand, within LU632_RS01660 at 327.697 kb on - strand, within LU632_RS01660 at 327.729 kb on + strand, within LU632_RS01660 at 327.729 kb on + strand, within LU632_RS01660 at 327.730 kb on - strand, within LU632_RS01660 at 327.730 kb on - strand, within LU632_RS01660 at 327.730 kb on - strand, within LU632_RS01660 at 327.730 kb on - strand, within LU632_RS01660 at 327.755 kb on + strand, within LU632_RS01660 at 327.783 kb on + strand, within LU632_RS01660 at 327.800 kb on + strand, within LU632_RS01660 at 327.801 kb on - strand, within LU632_RS01660 at 327.806 kb on + strand, within LU632_RS01660 at 327.806 kb on + strand, within LU632_RS01660 at 327.807 kb on - strand, within LU632_RS01660 at 327.807 kb on - strand, within LU632_RS01660 at 327.807 kb on - strand, within LU632_RS01660 at 327.807 kb on - strand, within LU632_RS01660 at 327.807 kb on - strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.810 kb on + strand, within LU632_RS01660 at 327.811 kb on - strand, within LU632_RS01660 at 327.811 kb on - strand, within LU632_RS01660 at 327.811 kb on - strand, within LU632_RS01660 at 327.811 kb on - strand, within LU632_RS01660 at 327.813 kb on - strand, within LU632_RS01660
Per-strain Table
Position Strand Gene LocusTag Fraction plant=Melon; plant sample=M2; plant location=P2 remove 325,650 - LU632_RS01645 0.68 +1.5 325,650 - LU632_RS01645 0.68 -3.4 325,652 + LU632_RS01645 0.69 -0.6 325,652 + LU632_RS01645 0.69 -1.7 325,652 + LU632_RS01645 0.69 -0.1 325,653 - LU632_RS01645 0.69 +2.1 325,653 - LU632_RS01645 0.69 +0.3 325,795 - -0.1 325,922 + LU632_RS01650 0.19 +0.9 325,923 - LU632_RS01650 0.19 -1.5 326,176 + LU632_RS01650 0.47 +1.5 326,176 + LU632_RS01650 0.47 +1.3 326,177 - LU632_RS01650 0.47 -0.1 326,246 + LU632_RS01650 0.55 -1.6 326,246 + LU632_RS01650 0.55 +0.1 326,246 + LU632_RS01650 0.55 -0.9 326,247 - LU632_RS01650 0.55 +0.3 326,360 + LU632_RS01650 0.68 -1.1 326,360 + LU632_RS01650 0.68 -0.4 326,360 + LU632_RS01650 0.68 -0.7 326,361 - LU632_RS01650 0.68 -0.7 326,383 + LU632_RS01650 0.70 +0.3 326,383 + LU632_RS01650 0.70 +0.4 326,383 + LU632_RS01650 0.70 +0.3 326,384 - LU632_RS01650 0.70 -0.4 326,384 - LU632_RS01650 0.70 +1.6 326,384 - LU632_RS01650 0.70 -0.7 326,384 - LU632_RS01650 0.70 +0.1 326,384 - LU632_RS01650 0.70 -0.6 326,385 + LU632_RS01650 0.70 +1.5 326,385 + LU632_RS01650 0.70 +0.3 326,385 + LU632_RS01650 0.70 -1.5 326,386 - LU632_RS01650 0.71 -2.5 326,386 - LU632_RS01650 0.71 -1.3 326,404 + LU632_RS01650 0.73 -0.1 326,404 + LU632_RS01650 0.73 +0.5 326,405 - LU632_RS01650 0.73 -0.5 326,405 - LU632_RS01650 0.73 +0.9 326,648 - -2.3 326,648 - +0.6 326,681 - +1.9 326,749 + LU632_RS01655 0.17 +0.3 327,179 - LU632_RS01655 0.87 +0.1 327,179 - LU632_RS01655 0.87 -0.2 327,201 - -1.0 327,201 - -1.3 327,202 + +0.9 327,255 - -1.8 327,255 - +2.0 327,259 - -1.6 327,453 - LU632_RS01660 0.21 -0.3 327,464 + LU632_RS01660 0.22 +0.6 327,573 + LU632_RS01660 0.33 -0.7 327,658 + LU632_RS01660 0.41 +0.5 327,697 - LU632_RS01660 0.45 +2.0 327,729 + LU632_RS01660 0.48 +0.6 327,729 + LU632_RS01660 0.48 -3.4 327,730 - LU632_RS01660 0.48 +0.5 327,730 - LU632_RS01660 0.48 +1.3 327,730 - LU632_RS01660 0.48 -0.2 327,730 - LU632_RS01660 0.48 +0.2 327,755 + LU632_RS01660 0.51 -1.6 327,783 + LU632_RS01660 0.54 +0.2 327,800 + LU632_RS01660 0.55 -1.0 327,801 - LU632_RS01660 0.55 -0.9 327,806 + LU632_RS01660 0.56 -0.5 327,806 + LU632_RS01660 0.56 +2.6 327,807 - LU632_RS01660 0.56 +1.1 327,807 - LU632_RS01660 0.56 +1.0 327,807 - LU632_RS01660 0.56 +0.0 327,807 - LU632_RS01660 0.56 -0.1 327,807 - LU632_RS01660 0.56 -0.1 327,810 + LU632_RS01660 0.56 -0.1 327,810 + LU632_RS01660 0.56 +0.9 327,810 + LU632_RS01660 0.56 -0.3 327,810 + LU632_RS01660 0.56 +3.9 327,810 + LU632_RS01660 0.56 -2.7 327,810 + LU632_RS01660 0.56 -0.1 327,810 + LU632_RS01660 0.56 +0.5 327,810 + LU632_RS01660 0.56 +0.5 327,810 + LU632_RS01660 0.56 +1.3 327,811 - LU632_RS01660 0.56 -1.5 327,811 - LU632_RS01660 0.56 +0.3 327,811 - LU632_RS01660 0.56 +0.4 327,811 - LU632_RS01660 0.56 +3.9 327,813 - LU632_RS01660 0.57 +1.3
Or see this region's nucleotide sequence