Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07810

Experiment: plant=Melon; plant sample=M1; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M1; plant location=P2
1,456,489	+				-2.8
1,456,490	-				-0.2
1,456,526	+				-0.5
1,456,527	-				+0.6
1,456,653	-				-0.5
1,456,653	-				+0.7
1,456,732	-				+0.1
1,456,740	-				+1.8
1,456,791	+				+0.5
1,456,792	-				-0.9
1,456,816	-				+5.2
1,456,872	+				+1.6
1,456,872	+				+1.9
1,456,953	+				+2.1
1,457,227	+	flk	LU632_RS07810	0.33	+0.1
1,457,227	+	flk	LU632_RS07810	0.33	+2.1
1,457,228	-	flk	LU632_RS07810	0.33	+1.5
1,457,260	-	flk	LU632_RS07810	0.36	+1.1
1,457,432	+	flk	LU632_RS07810	0.52	+1.1
1,457,433	-	flk	LU632_RS07810	0.53	-0.5
1,457,433	-	flk	LU632_RS07810	0.53	+2.1
1,457,434	+	flk	LU632_RS07810	0.53	+0.3
1,457,434	+	flk	LU632_RS07810	0.53	+1.0
1,457,435	-	flk	LU632_RS07810	0.53	-0.1
1,457,482	+	flk	LU632_RS07810	0.57	+0.3
1,457,483	-	flk	LU632_RS07810	0.57	-0.9
1,457,483	-	flk	LU632_RS07810	0.57	+0.7
1,457,759	+	flk	LU632_RS07810	0.84	-0.5
1,457,782	+	flk	LU632_RS07810	0.86	+1.0
1,457,782	+	flk	LU632_RS07810	0.86	+2.8
1,457,783	-	flk	LU632_RS07810	0.86	+0.9
1,457,879	-				-0.3
1,458,006	+				+0.1
1,458,010	+				+0.1
1,458,038	-				-1.6
1,458,257	-				-0.0
1,458,257	-				-1.9
1,458,269	-				+5.1
1,458,272	-				+0.7
1,458,272	-				+0.2
1,458,272	-				+0.2
1,458,274	+				-0.9
1,458,297	+				-0.1
1,458,297	+				+0.7
1,458,297	+				+0.1
1,458,441	-				-0.2
1,458,441	-				+2.1
1,458,449	-				+0.1
1,458,515	+				-0.3
1,458,515	+				-0.9