Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS03355

Experiment: plant=Melon; plant sample=M1; plant location=P2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=M1; plant location=P2
688,430	+				-0.4
688,473	-				-1.6
688,501	-				-1.2
688,501	-				+0.4
688,511	+				+1.4
688,586	+				+1.4
688,604	-				-0.9
688,617	+				-0.9
688,618	-				-0.5
688,644	+				+0.2
688,648	+				-0.0
688,648	+				+1.1
688,730	-				+0.8
688,747	+				-0.4
688,747	+				+0.1
688,748	-				+1.9
688,748	-				-2.2
688,811	-				-1.4
688,811	-				-0.5
688,815	-				+0.4
688,920	-				-1.5
688,920	-				-0.7
689,106	+				-1.2
689,107	-				-1.7
689,172	+				-0.2
689,172	+				-0.8
689,303	-		LU632_RS03355	0.68	+0.2
689,306	+		LU632_RS03355	0.69	-0.4
689,307	-		LU632_RS03355	0.69	-1.4
689,307	-		LU632_RS03355	0.69	+0.5
689,467	+				-0.8
689,467	+				-0.2
689,479	-				-0.1
689,560	-				+0.3
689,560	-				-1.4
689,562	-				-2.3
689,572	+				+1.1
689,637	+				+0.2
689,862	+		LU632_RS03360	0.15	-0.1
690,015	-		LU632_RS03360	0.24	+0.4
690,184	-		LU632_RS03360	0.34	-1.8
690,184	-		LU632_RS03360	0.34	-1.5