Strain Fitness in Erwinia amylovora T8 around OLJFJH_10855

Experiment: Matrix:KB soft agar;Phage:PBS;Temp:28;Samp:32-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:KB soft agar;Phage:PBS;Temp:28;Samp:32-2
2,265,547	-				+0.3
2,265,739	+				+0.1
2,265,828	-		OLJFJH_10850	0.11	-1.7
2,265,828	-		OLJFJH_10850	0.11	-2.6
2,266,106	+		OLJFJH_10850	0.66	-2.1
2,266,124	+		OLJFJH_10850	0.70	-2.4
2,266,125	-		OLJFJH_10850	0.70	-2.6
2,266,158	+		OLJFJH_10850	0.77	+0.1
2,266,244	+				-1.8
2,266,285	+				-1.5
2,266,286	-				-1.0
2,266,293	-				-1.5
2,266,432	-				-1.2
2,266,507	+		OLJFJH_10855	0.11	+0.0
2,266,508	-		OLJFJH_10855	0.11	-4.6
2,266,508	-		OLJFJH_10855	0.11	-3.1
2,266,512	+		OLJFJH_10855	0.11	-2.1
2,266,513	-		OLJFJH_10855	0.11	-2.1
2,266,513	-		OLJFJH_10855	0.11	-0.5
2,266,604	-		OLJFJH_10855	0.17	-2.0
2,266,617	+		OLJFJH_10855	0.17	-2.6
2,266,618	-		OLJFJH_10855	0.17	-3.7
2,266,626	-		OLJFJH_10855	0.18	+1.1
2,266,670	+		OLJFJH_10855	0.20	-1.6
2,266,670	+		OLJFJH_10855	0.20	-4.2
2,266,671	-		OLJFJH_10855	0.20	-3.1
2,266,671	-		OLJFJH_10855	0.20	-4.0
2,266,795	-		OLJFJH_10855	0.28	+0.3
2,267,016	-		OLJFJH_10855	0.40	-0.5
2,267,028	+		OLJFJH_10855	0.41	-0.2
2,267,047	-		OLJFJH_10855	0.42	-2.8
2,267,094	+		OLJFJH_10855	0.45	-1.8
2,267,095	-		OLJFJH_10855	0.45	-3.5
2,267,097	-		OLJFJH_10855	0.45	-4.1
2,267,097	-		OLJFJH_10855	0.45	-1.7
2,267,309	+		OLJFJH_10855	0.57	+0.5
2,267,310	-		OLJFJH_10855	0.57	-2.0
2,267,310	-		OLJFJH_10855	0.57	-2.9
2,267,310	-		OLJFJH_10855	0.57	-3.4
2,267,330	-		OLJFJH_10855	0.59	-2.5
2,267,363	+		OLJFJH_10855	0.60	-1.0
2,267,363	+		OLJFJH_10855	0.60	-2.1
2,267,363	+		OLJFJH_10855	0.60	-1.9
2,267,363	+		OLJFJH_10855	0.60	-1.0
2,267,363	+		OLJFJH_10855	0.60	-4.3
2,267,363	+		OLJFJH_10855	0.60	-2.7
2,267,364	-		OLJFJH_10855	0.61	-1.9
2,267,364	-		OLJFJH_10855	0.61	-2.6
2,267,364	-		OLJFJH_10855	0.61	-3.1
2,267,364	-		OLJFJH_10855	0.61	-0.7
2,267,364	-		OLJFJH_10855	0.61	-3.1
2,267,364	-		OLJFJH_10855	0.61	-3.4
2,267,364	-		OLJFJH_10855	0.61	-2.0
2,267,364	-		OLJFJH_10855	0.61	-3.8
2,267,515	+		OLJFJH_10855	0.69	-1.7
2,267,611	-		OLJFJH_10855	0.75	-3.2
2,267,611	-		OLJFJH_10855	0.75	-1.5
2,267,611	-		OLJFJH_10855	0.75	-0.0
2,267,626	-		OLJFJH_10855	0.76	+0.1
2,267,626	-		OLJFJH_10855	0.76	-2.0
2,267,875	-				-2.6
2,267,970	+				+1.1
2,268,028	+				-1.2
2,268,131	+				-1.0
2,268,131	+				-0.5
2,268,131	+				-2.0
2,268,131	+				-2.9
2,268,132	-				-1.5
2,268,132	-				+0.6
2,268,132	-				-0.1
2,268,132	-				-0.3
2,268,132	-				+0.5
2,268,132	-				-1.2
2,268,133	+				-2.8
2,268,133	+				-0.7
2,268,133	+				-1.6
2,268,133	+				-1.7
2,268,133	+				-1.7
2,268,133	+				-1.1
2,268,134	-				-0.2
2,268,134	-				+0.7
2,268,134	-				+0.9
2,268,134	-				-1.4
2,268,134	-				+1.1
2,268,134	-				+0.1
2,268,134	-				-0.7
2,268,134	-				+0.2
2,268,134	-				-0.7
2,268,135	+				+0.3
2,268,135	+				-1.7
2,268,135	+				-2.8
2,268,135	+				-1.1
2,268,135	+				-3.0
2,268,136	-				-1.0
2,268,136	-				-0.7
2,268,136	-				+0.2
2,268,206	+				-1.3
2,268,207	-				-0.2
2,268,207	-				+0.2
2,268,215	+				-1.5
2,268,215	+				-1.7
2,268,229	+				-2.4
2,268,392	+		OLJFJH_10860	0.54	+0.1
2,268,404	+		OLJFJH_10860	0.59	-2.5
2,268,513	-				-1.6
2,268,513	-				-1.1
2,268,549	+				+1.1
2,268,582	+				+0.1
2,268,616	+				-1.5
2,268,692	+				-1.2
2,268,795	+				-0.1
2,268,812	+				-1.9
2,268,833	+				+0.1
2,268,847	-				+0.2
2,268,847	-				-0.3
2,268,847	-				-0.0
2,268,982	+				-1.1