Experiment: Sucrose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0372 and Echvi_0373 are separated by 3 nucleotides Echvi_0373 and Echvi_0374 are separated by 12 nucleotides
Echvi_0372: Echvi_0372 - conserved hypothetical protein, YceG family, at 400,296 to 401,339
_0372
Echvi_0373: Echvi_0373 - acyl-CoA thioester hydrolase, YbgC/YbaW family, at 401,343 to 401,747
_0373
Echvi_0374: Echvi_0374 - Predicted membrane protein, at 401,760 to 402,704
_0374
Position (kb) 401
402 Strain fitness (log2 ratio) -2
-1
0
1
2 at 400.819 kb on - strand, within Echvi_0372 at 400.829 kb on + strand, within Echvi_0372 at 400.857 kb on + strand at 401.004 kb on + strand, within Echvi_0372 at 401.025 kb on - strand, within Echvi_0372 at 401.121 kb on + strand, within Echvi_0372 at 401.159 kb on + strand, within Echvi_0372 at 401.163 kb on - strand, within Echvi_0372 at 401.163 kb on - strand, within Echvi_0372 at 401.217 kb on + strand, within Echvi_0372 at 401.218 kb on - strand, within Echvi_0372 at 401.218 kb on - strand, within Echvi_0372 at 401.221 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.224 kb on - strand, within Echvi_0372 at 401.305 kb on - strand at 401.334 kb on + strand at 401.337 kb on + strand at 401.342 kb on + strand at 401.342 kb on + strand at 401.343 kb on - strand at 401.343 kb on - strand at 401.349 kb on - strand at 401.349 kb on - strand at 401.365 kb on + strand at 401.365 kb on + strand at 401.366 kb on - strand at 401.372 kb on - strand at 401.400 kb on + strand, within Echvi_0373 at 401.400 kb on + strand, within Echvi_0373 at 401.400 kb on + strand, within Echvi_0373 at 401.401 kb on - strand, within Echvi_0373 at 401.406 kb on + strand, within Echvi_0373 at 401.406 kb on + strand, within Echvi_0373 at 401.406 kb on + strand, within Echvi_0373 at 401.407 kb on - strand, within Echvi_0373 at 401.409 kb on + strand, within Echvi_0373 at 401.410 kb on - strand, within Echvi_0373 at 401.410 kb on - strand, within Echvi_0373 at 401.418 kb on + strand, within Echvi_0373 at 401.418 kb on + strand, within Echvi_0373 at 401.419 kb on - strand, within Echvi_0373 at 401.427 kb on + strand, within Echvi_0373 at 401.427 kb on + strand, within Echvi_0373 at 401.428 kb on - strand, within Echvi_0373 at 401.512 kb on + strand, within Echvi_0373 at 401.512 kb on + strand, within Echvi_0373 at 401.512 kb on + strand, within Echvi_0373 at 401.515 kb on + strand, within Echvi_0373 at 401.516 kb on - strand, within Echvi_0373 at 401.516 kb on - strand, within Echvi_0373 at 401.532 kb on + strand, within Echvi_0373 at 401.560 kb on + strand, within Echvi_0373 at 401.560 kb on + strand, within Echvi_0373 at 401.560 kb on + strand, within Echvi_0373 at 401.561 kb on - strand, within Echvi_0373 at 401.561 kb on - strand, within Echvi_0373 at 401.722 kb on + strand at 401.740 kb on - strand at 401.740 kb on - strand at 401.785 kb on + strand at 401.806 kb on - strand at 401.857 kb on - strand, within Echvi_0374 at 401.930 kb on + strand, within Echvi_0374 at 401.988 kb on - strand, within Echvi_0374 at 402.038 kb on - strand, within Echvi_0374 at 402.145 kb on + strand, within Echvi_0374 at 402.146 kb on - strand, within Echvi_0374 at 402.146 kb on - strand, within Echvi_0374 at 402.147 kb on + strand, within Echvi_0374 at 402.147 kb on + strand, within Echvi_0374 at 402.148 kb on - strand, within Echvi_0374 at 402.180 kb on - strand, within Echvi_0374 at 402.199 kb on - strand, within Echvi_0374 at 402.289 kb on + strand, within Echvi_0374 at 402.290 kb on - strand, within Echvi_0374 at 402.336 kb on + strand, within Echvi_0374 at 402.336 kb on + strand, within Echvi_0374 at 402.361 kb on - strand, within Echvi_0374 at 402.361 kb on - strand, within Echvi_0374 at 402.361 kb on - strand, within Echvi_0374 at 402.361 kb on - strand, within Echvi_0374 at 402.363 kb on - strand, within Echvi_0374 at 402.369 kb on + strand, within Echvi_0374 at 402.401 kb on - strand, within Echvi_0374 at 402.435 kb on - strand, within Echvi_0374 at 402.435 kb on - strand, within Echvi_0374 at 402.526 kb on - strand, within Echvi_0374 at 402.526 kb on - strand, within Echvi_0374 at 402.587 kb on + strand, within Echvi_0374 at 402.587 kb on + strand, within Echvi_0374 at 402.658 kb on + strand at 402.658 kb on + strand at 402.658 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Sucrose (C) remove 400,819 - Echvi_0372 0.50 -1.0 400,829 + Echvi_0372 0.51 -0.0 400,857 + +1.0 401,004 + Echvi_0372 0.68 +1.5 401,025 - Echvi_0372 0.70 +0.2 401,121 + Echvi_0372 0.79 +0.8 401,159 + Echvi_0372 0.83 -0.0 401,163 - Echvi_0372 0.83 -0.0 401,163 - Echvi_0372 0.83 -1.0 401,217 + Echvi_0372 0.88 -0.3 401,218 - Echvi_0372 0.88 +1.0 401,218 - Echvi_0372 0.88 -2.2 401,221 + Echvi_0372 0.89 -0.3 401,223 + Echvi_0372 0.89 -0.3 401,223 + Echvi_0372 0.89 +0.0 401,223 + Echvi_0372 0.89 -0.4 401,223 + Echvi_0372 0.89 -0.3 401,223 + Echvi_0372 0.89 +1.1 401,223 + Echvi_0372 0.89 +1.2 401,224 - Echvi_0372 0.89 +1.0 401,305 - -0.6 401,334 + -1.0 401,337 + +0.9 401,342 + -0.0 401,342 + +1.0 401,343 - -0.0 401,343 - -1.9 401,349 - +0.4 401,349 - +0.1 401,365 + -1.9 401,365 + -1.0 401,366 - +1.7 401,372 - -1.1 401,400 + Echvi_0373 0.14 -0.6 401,400 + Echvi_0373 0.14 -0.0 401,400 + Echvi_0373 0.14 +0.6 401,401 - Echvi_0373 0.14 -1.9 401,406 + Echvi_0373 0.16 -0.0 401,406 + Echvi_0373 0.16 -1.1 401,406 + Echvi_0373 0.16 -0.5 401,407 - Echvi_0373 0.16 -0.6 401,409 + Echvi_0373 0.16 -0.3 401,410 - Echvi_0373 0.17 +0.4 401,410 - Echvi_0373 0.17 -2.2 401,418 + Echvi_0373 0.19 -0.9 401,418 + Echvi_0373 0.19 -0.5 401,419 - Echvi_0373 0.19 +0.0 401,427 + Echvi_0373 0.21 -0.1 401,427 + Echvi_0373 0.21 -1.8 401,428 - Echvi_0373 0.21 -0.2 401,512 + Echvi_0373 0.42 -0.5 401,512 + Echvi_0373 0.42 +0.1 401,512 + Echvi_0373 0.42 -1.0 401,515 + Echvi_0373 0.42 +0.1 401,516 - Echvi_0373 0.43 -0.6 401,516 - Echvi_0373 0.43 -1.3 401,532 + Echvi_0373 0.47 -0.2 401,560 + Echvi_0373 0.54 -0.5 401,560 + Echvi_0373 0.54 +1.5 401,560 + Echvi_0373 0.54 -0.5 401,561 - Echvi_0373 0.54 -0.4 401,561 - Echvi_0373 0.54 -0.0 401,722 + +0.1 401,740 - -0.4 401,740 - -0.3 401,785 + +1.1 401,806 - +0.2 401,857 - Echvi_0374 0.10 +1.0 401,930 + Echvi_0374 0.18 -0.0 401,988 - Echvi_0374 0.24 +0.7 402,038 - Echvi_0374 0.29 +0.6 402,145 + Echvi_0374 0.41 -0.2 402,146 - Echvi_0374 0.41 -0.3 402,146 - Echvi_0374 0.41 +0.4 402,147 + Echvi_0374 0.41 +0.3 402,147 + Echvi_0374 0.41 -0.4 402,148 - Echvi_0374 0.41 -0.6 402,180 - Echvi_0374 0.44 +0.5 402,199 - Echvi_0374 0.46 -1.0 402,289 + Echvi_0374 0.56 +0.2 402,290 - Echvi_0374 0.56 +0.1 402,336 + Echvi_0374 0.61 +0.5 402,336 + Echvi_0374 0.61 +0.5 402,361 - Echvi_0374 0.64 -2.0 402,361 - Echvi_0374 0.64 +1.5 402,361 - Echvi_0374 0.64 +0.0 402,361 - Echvi_0374 0.64 -0.3 402,363 - Echvi_0374 0.64 +0.5 402,369 + Echvi_0374 0.64 +0.3 402,401 - Echvi_0374 0.68 +0.0 402,435 - Echvi_0374 0.71 +1.0 402,435 - Echvi_0374 0.71 -0.3 402,526 - Echvi_0374 0.81 -0.2 402,526 - Echvi_0374 0.81 -0.3 402,587 + Echvi_0374 0.88 -1.6 402,587 + Echvi_0374 0.88 -0.2 402,658 + +2.2 402,658 + -0.8 402,658 + +0.2
Or see this region's nucleotide sequence