Strain Fitness in Pseudomonas simiae WCS417 around PS417_28535

Experiment: Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N)
6,161,282	+				+0.4
6,161,282	+				+0.3
6,161,282	+				-0.2
6,161,283	-				-0.9
6,161,286	+				-0.4
6,161,287	-				-0.1
6,161,287	-				-0.2
6,161,467	-		PS417_28530	0.24	+0.7
6,161,556	-		PS417_28530	0.34	+0.0
6,161,560	+		PS417_28530	0.34	+0.0
6,161,560	+		PS417_28530	0.34	-0.1
6,161,617	+		PS417_28530	0.40	-1.7
6,161,617	+		PS417_28530	0.40	-0.0
6,161,617	+		PS417_28530	0.40	+0.2
6,161,688	+		PS417_28530	0.48	-0.3
6,161,689	-		PS417_28530	0.48	-1.5
6,161,689	-		PS417_28530	0.48	+0.7
6,161,692	+		PS417_28530	0.48	-0.8
6,161,693	-		PS417_28530	0.48	+0.1
6,161,729	+		PS417_28530	0.52	-0.5
6,161,854	+		PS417_28530	0.65	-0.1
6,161,854	+		PS417_28530	0.65	-0.4
6,161,927	+		PS417_28530	0.73	-1.7
6,161,927	+		PS417_28530	0.73	+0.3
6,161,927	+		PS417_28530	0.73	+0.1
6,161,927	+		PS417_28530	0.73	+0.1
6,161,927	+		PS417_28530	0.73	-0.5
6,161,927	+		PS417_28530	0.73	+0.5
6,161,928	-		PS417_28530	0.73	+0.2
6,161,928	-		PS417_28530	0.73	-0.2
6,161,928	-		PS417_28530	0.73	-0.1
6,161,928	-		PS417_28530	0.73	+0.2
6,162,057	+		PS417_28530	0.87	+0.6
6,162,058	-		PS417_28530	0.87	+0.0
6,162,058	-		PS417_28530	0.87	-0.5
6,162,088	+				-0.5
6,162,141	-				-0.4
6,162,141	-				-0.4
6,162,141	-				+0.7
6,162,141	-				+0.0
6,162,141	-				-0.2
6,162,233	+				-0.7
6,162,234	-				-0.9
6,162,272	+				-0.3
6,162,273	-				+1.2
6,162,318	-				+1.7
6,162,371	+				-0.3
6,162,371	+				-0.2
6,162,372	-				-0.2
6,162,405	+				-0.0
6,162,406	-				-0.1
6,162,406	-				-0.3
6,162,406	-				+0.1
6,162,406	-				-0.1
6,162,406	-				+0.4
6,162,406	-				-0.3
6,162,528	+		PS417_28535	0.10	-0.2
6,162,603	+		PS417_28535	0.14	-1.5
6,162,604	-		PS417_28535	0.14	+0.7
6,162,663	+		PS417_28535	0.16	-1.7
6,162,663	+		PS417_28535	0.16	-1.1
6,162,708	+		PS417_28535	0.18	+0.3
6,162,708	+		PS417_28535	0.18	-1.2
6,162,709	-		PS417_28535	0.18	-0.5
6,162,734	+		PS417_28535	0.19	+1.4
6,162,734	+		PS417_28535	0.19	-0.5
6,162,832	+		PS417_28535	0.23	-0.7
6,162,840	+		PS417_28535	0.23	-0.8
6,162,840	+		PS417_28535	0.23	-0.7
6,162,841	-		PS417_28535	0.23	+1.2
6,162,851	+		PS417_28535	0.24	+0.2
6,162,851	+		PS417_28535	0.24	-0.3
6,162,852	-		PS417_28535	0.24	+0.9
6,162,852	-		PS417_28535	0.24	-0.7
6,162,898	+		PS417_28535	0.26	-0.3
6,162,898	+		PS417_28535	0.26	-0.1
6,162,898	+		PS417_28535	0.26	-0.4
6,162,898	+		PS417_28535	0.26	-0.0
6,162,930	+		PS417_28535	0.27	-0.9
6,162,979	-		PS417_28535	0.29	-0.2
6,163,098	-		PS417_28535	0.34	-0.1
6,163,213	+		PS417_28535	0.39	-0.4
6,163,213	+		PS417_28535	0.39	+0.1
6,163,214	-		PS417_28535	0.39	+0.5
6,163,226	+		PS417_28535	0.39	-0.1
6,163,269	+		PS417_28535	0.41	+0.1
6,163,269	+		PS417_28535	0.41	-0.7
6,163,269	+		PS417_28535	0.41	-0.5
6,163,269	+		PS417_28535	0.41	+1.7
6,163,269	+		PS417_28535	0.41	-0.2
6,163,270	-		PS417_28535	0.41	-0.6
6,163,270	-		PS417_28535	0.41	+0.5
6,163,270	-		PS417_28535	0.41	-0.5
6,163,306	-		PS417_28535	0.42	-0.2
6,163,388	+		PS417_28535	0.46	+0.7
6,163,445	+		PS417_28535	0.48	-0.0
6,163,445	+		PS417_28535	0.48	-0.3
6,163,446	-		PS417_28535	0.48	-0.4
6,163,530	+		PS417_28535	0.52	-0.2
6,163,530	+		PS417_28535	0.52	-0.9
6,163,532	+		PS417_28535	0.52	-0.9
6,163,532	+		PS417_28535	0.52	+0.1
6,163,533	-		PS417_28535	0.52	-0.6
6,163,533	-		PS417_28535	0.52	+0.8
6,163,533	-		PS417_28535	0.52	+0.5
6,163,533	-		PS417_28535	0.52	+0.4
6,163,617	+		PS417_28535	0.55	-0.7
6,163,627	-		PS417_28535	0.56	-0.4
6,163,628	+		PS417_28535	0.56	-0.7
6,163,697	+		PS417_28535	0.58	-0.5
6,163,720	-		PS417_28535	0.59	-0.0
6,163,779	+		PS417_28535	0.62	-0.4
6,163,779	+		PS417_28535	0.62	-0.0
6,163,780	-		PS417_28535	0.62	+0.7
6,163,780	-		PS417_28535	0.62	-0.1
6,163,780	-		PS417_28535	0.62	-0.1
6,163,881	+		PS417_28535	0.66	-1.9
6,163,881	+		PS417_28535	0.66	-0.3
6,163,882	-		PS417_28535	0.66	+0.3
6,163,882	-		PS417_28535	0.66	-0.2
6,163,882	-		PS417_28535	0.66	-0.2
6,163,882	-		PS417_28535	0.66	+1.5
6,163,993	-		PS417_28535	0.71	-1.0
6,163,993	-		PS417_28535	0.71	-0.5
6,164,010	+		PS417_28535	0.71	+0.2
6,164,010	+		PS417_28535	0.71	+0.3
6,164,011	-		PS417_28535	0.71	-0.7
6,164,011	-		PS417_28535	0.71	+0.3
6,164,037	+		PS417_28535	0.72	-0.2
6,164,037	+		PS417_28535	0.72	-0.0
6,164,046	+		PS417_28535	0.73	-0.4
6,164,047	-		PS417_28535	0.73	-0.4
6,164,047	-		PS417_28535	0.73	+0.1
6,164,140	-		PS417_28535	0.77	-0.3
6,164,182	-		PS417_28535	0.78	-0.4
6,164,182	-		PS417_28535	0.78	-0.3
6,164,208	+		PS417_28535	0.79	+0.1
6,164,208	+		PS417_28535	0.79	+0.1
6,164,208	+		PS417_28535	0.79	-0.3
6,164,319	+		PS417_28535	0.84	-1.1
6,164,320	-		PS417_28535	0.84	+0.2
6,164,320	-		PS417_28535	0.84	-0.2
6,164,325	+		PS417_28535	0.84	-0.4
6,164,325	+		PS417_28535	0.84	-1.3
6,164,326	-		PS417_28535	0.84	-0.1
6,164,326	-		PS417_28535	0.84	-0.5
6,164,326	-		PS417_28535	0.84	-0.1
6,164,425	-		PS417_28535	0.88	+0.4
6,164,499	+				-0.5
6,164,628	+				-0.5
6,164,628	+				-0.0
6,164,628	+				-0.7
6,164,628	+				-0.4
6,164,629	-				-0.4
6,164,629	-				+0.4
6,164,629	-				-0.9
6,164,629	-				-1.8
6,164,629	-				-0.8
6,164,629	-				-0.4
6,164,629	-				-0.2
6,164,629	-				-0.5
6,164,632	+				-0.2
6,164,632	+				+0.2
6,164,633	-				+0.5
6,164,700	+				-1.3