Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02825 and PS417_02830 overlap by 1 nucleotides PS417_02830 and PS417_02835 are separated by 166 nucleotides
PS417_02825: PS417_02825 - amino acid ABC transporter permease, at 639,326 to 640,393
_02825
PS417_02830: PS417_02830 - urea ABC transporter permease, at 640,393 to 641,895
_02830
PS417_02835: PS417_02835 - branched-chain amino acid ABC transporter substrate-binding protein, at 642,062 to 643,327
_02835
Position (kb) 640
641
642 Strain fitness (log2 ratio) -1
0
1
2 at 639.576 kb on + strand, within PS417_02825 at 639.576 kb on + strand, within PS417_02825 at 639.577 kb on - strand, within PS417_02825 at 639.577 kb on - strand, within PS417_02825 at 640.111 kb on - strand, within PS417_02825 at 640.111 kb on - strand, within PS417_02825 at 640.215 kb on + strand, within PS417_02825 at 640.248 kb on + strand, within PS417_02825 at 640.258 kb on + strand, within PS417_02825 at 640.259 kb on - strand, within PS417_02825 at 640.607 kb on + strand, within PS417_02830 at 640.608 kb on - strand, within PS417_02830 at 640.854 kb on - strand, within PS417_02830 at 641.143 kb on - strand, within PS417_02830 at 641.143 kb on - strand, within PS417_02830 at 641.144 kb on + strand, within PS417_02830 at 641.144 kb on + strand, within PS417_02830 at 641.145 kb on - strand, within PS417_02830 at 641.145 kb on - strand, within PS417_02830 at 641.145 kb on - strand, within PS417_02830 at 641.641 kb on + strand, within PS417_02830 at 641.641 kb on + strand, within PS417_02830 at 641.641 kb on + strand, within PS417_02830 at 641.642 kb on - strand, within PS417_02830 at 641.642 kb on - strand, within PS417_02830 at 641.966 kb on - strand at 642.112 kb on - strand at 642.112 kb on - strand at 642.337 kb on + strand, within PS417_02835 at 642.337 kb on + strand, within PS417_02835 at 642.337 kb on + strand, within PS417_02835 at 642.337 kb on + strand, within PS417_02835 at 642.338 kb on - strand, within PS417_02835 at 642.338 kb on - strand, within PS417_02835 at 642.338 kb on - strand, within PS417_02835 at 642.338 kb on - strand, within PS417_02835 at 642.347 kb on + strand, within PS417_02835 at 642.347 kb on + strand, within PS417_02835 at 642.347 kb on + strand, within PS417_02835 at 642.347 kb on + strand, within PS417_02835 at 642.348 kb on - strand, within PS417_02835 at 642.348 kb on - strand, within PS417_02835 at 642.351 kb on + strand, within PS417_02835 at 642.351 kb on + strand, within PS417_02835 at 642.351 kb on + strand, within PS417_02835 at 642.351 kb on + strand, within PS417_02835 at 642.352 kb on - strand, within PS417_02835 at 642.352 kb on - strand, within PS417_02835 at 642.352 kb on - strand, within PS417_02835 at 642.417 kb on + strand, within PS417_02835 at 642.474 kb on + strand, within PS417_02835 at 642.474 kb on + strand, within PS417_02835 at 642.475 kb on - strand, within PS417_02835 at 642.717 kb on + strand, within PS417_02835 at 642.718 kb on - strand, within PS417_02835 at 642.718 kb on - strand, within PS417_02835 at 642.802 kb on - strand, within PS417_02835 at 642.858 kb on + strand, within PS417_02835 at 642.859 kb on - strand, within PS417_02835
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 639,576 + PS417_02825 0.23 -0.8 639,576 + PS417_02825 0.23 -1.7 639,577 - PS417_02825 0.24 -0.3 639,577 - PS417_02825 0.24 -0.2 640,111 - PS417_02825 0.74 -0.4 640,111 - PS417_02825 0.74 -0.6 640,215 + PS417_02825 0.83 -1.2 640,248 + PS417_02825 0.86 -0.7 640,258 + PS417_02825 0.87 -1.0 640,259 - PS417_02825 0.87 +0.1 640,607 + PS417_02830 0.14 +0.0 640,608 - PS417_02830 0.14 +0.3 640,854 - PS417_02830 0.31 -0.6 641,143 - PS417_02830 0.50 -0.5 641,143 - PS417_02830 0.50 -0.5 641,144 + PS417_02830 0.50 +0.1 641,144 + PS417_02830 0.50 +0.3 641,145 - PS417_02830 0.50 -0.0 641,145 - PS417_02830 0.50 -0.4 641,145 - PS417_02830 0.50 -1.2 641,641 + PS417_02830 0.83 +0.3 641,641 + PS417_02830 0.83 +0.0 641,641 + PS417_02830 0.83 -0.2 641,642 - PS417_02830 0.83 -1.2 641,642 - PS417_02830 0.83 +0.5 641,966 - -0.5 642,112 - +1.2 642,112 - -0.0 642,337 + PS417_02835 0.22 +0.7 642,337 + PS417_02835 0.22 -0.8 642,337 + PS417_02835 0.22 -0.5 642,337 + PS417_02835 0.22 +0.6 642,338 - PS417_02835 0.22 +0.1 642,338 - PS417_02835 0.22 +1.9 642,338 - PS417_02835 0.22 +0.1 642,338 - PS417_02835 0.22 +0.4 642,347 + PS417_02835 0.23 -0.4 642,347 + PS417_02835 0.23 -0.4 642,347 + PS417_02835 0.23 -0.7 642,347 + PS417_02835 0.23 -1.1 642,348 - PS417_02835 0.23 -0.3 642,348 - PS417_02835 0.23 -1.5 642,351 + PS417_02835 0.23 -1.3 642,351 + PS417_02835 0.23 +0.4 642,351 + PS417_02835 0.23 -0.7 642,351 + PS417_02835 0.23 -0.0 642,352 - PS417_02835 0.23 +0.2 642,352 - PS417_02835 0.23 +0.1 642,352 - PS417_02835 0.23 +0.0 642,417 + PS417_02835 0.28 -0.6 642,474 + PS417_02835 0.33 -0.1 642,474 + PS417_02835 0.33 -0.7 642,475 - PS417_02835 0.33 +0.3 642,717 + PS417_02835 0.52 +0.3 642,718 - PS417_02835 0.52 +0.5 642,718 - PS417_02835 0.52 +0.3 642,802 - PS417_02835 0.58 +0.6 642,858 + PS417_02835 0.63 +0.5 642,859 - PS417_02835 0.63 +1.0
Or see this region's nucleotide sequence