Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_01580 and PS417_01585 are separated by 66 nucleotides PS417_01585 and PS417_01590 are separated by 50 nucleotides PS417_01590 and PS417_01595 are separated by 1 nucleotides
PS417_01580: PS417_01580 - imidazole glycerol phosphate synthase, at 348,434 to 349,204
_01580
PS417_01585: PS417_01585 - amino acid ABC transporter substrate-binding protein, at 349,271 to 350,026
_01585
PS417_01590: PS417_01590 - polysaccharide deacetylase, at 350,077 to 350,850
_01590
PS417_01595: PS417_01595 - peptidase S41, at 350,852 to 352,168
_01595
Position (kb) 350
351 Strain fitness (log2 ratio) -1
0
1 at 349.263 kb on + strand at 349.268 kb on + strand at 349.268 kb on + strand at 349.268 kb on + strand at 349.268 kb on + strand at 349.268 kb on + strand at 349.268 kb on + strand at 349.269 kb on - strand at 349.269 kb on - strand at 349.269 kb on - strand at 349.269 kb on - strand at 349.269 kb on - strand at 349.303 kb on + strand at 349.491 kb on - strand, within PS417_01585 at 349.526 kb on + strand, within PS417_01585 at 349.526 kb on + strand, within PS417_01585 at 349.527 kb on - strand, within PS417_01585 at 349.527 kb on - strand, within PS417_01585 at 349.709 kb on + strand, within PS417_01585 at 349.710 kb on - strand at 349.710 kb on - strand, within PS417_01585 at 349.753 kb on - strand, within PS417_01585 at 349.848 kb on - strand, within PS417_01585 at 349.914 kb on - strand, within PS417_01585 at 350.018 kb on + strand at 350.018 kb on + strand at 350.018 kb on + strand at 350.019 kb on - strand at 350.066 kb on - strand at 350.149 kb on - strand at 350.504 kb on + strand, within PS417_01590 at 350.765 kb on + strand, within PS417_01590 at 350.851 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 349,263 + -0.1 349,268 + -1.5 349,268 + +0.2 349,268 + +0.6 349,268 + -1.5 349,268 + -0.0 349,268 + +0.8 349,269 - +0.7 349,269 - -0.3 349,269 - +0.2 349,269 - +0.5 349,269 - -0.1 349,303 + +0.4 349,491 - PS417_01585 0.29 +0.3 349,526 + PS417_01585 0.34 -0.6 349,526 + PS417_01585 0.34 -0.4 349,527 - PS417_01585 0.34 -1.5 349,527 - PS417_01585 0.34 +0.1 349,709 + PS417_01585 0.58 +0.2 349,710 - +0.9 349,710 - PS417_01585 0.58 +0.1 349,753 - PS417_01585 0.64 -0.9 349,848 - PS417_01585 0.76 -1.3 349,914 - PS417_01585 0.85 -0.1 350,018 + -0.4 350,018 + -0.2 350,018 + -0.5 350,019 - -0.2 350,066 - -0.4 350,149 - +0.4 350,504 + PS417_01590 0.55 -0.5 350,765 + PS417_01590 0.89 -0.9 350,851 - -0.9
Or see this region's nucleotide sequence