Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11605 and PS417_11610 overlap by 4 nucleotides PS417_11610 and PS417_11615 are separated by 10 nucleotides PS417_11615 and PS417_11620 are separated by 149 nucleotides
PS417_11605: PS417_11605 - urea ABC transporter permease, at 2,496,289 to 2,497,452
_11605
PS417_11610: PS417_11610 - urea ABC transporter ATP-binding protein, at 2,497,449 to 2,498,207
_11610
PS417_11615: PS417_11615 - urea ABC transporter ATP-binding protein, at 2,498,218 to 2,498,907
_11615
PS417_11620: PS417_11620 - hypothetical protein, at 2,499,057 to 2,500,295
_11620
Position (kb)
2497
2498
2499 Strain fitness (log2 ratio)
-1
0
1 at 2496.745 kb on + strand, within PS417_11605 at 2496.746 kb on - strand, within PS417_11605 at 2496.746 kb on - strand, within PS417_11605 at 2496.895 kb on + strand, within PS417_11605 at 2497.111 kb on - strand, within PS417_11605 at 2497.201 kb on + strand, within PS417_11605 at 2497.201 kb on + strand, within PS417_11605 at 2497.202 kb on - strand, within PS417_11605 at 2497.234 kb on + strand, within PS417_11605 at 2497.303 kb on + strand, within PS417_11605 at 2497.802 kb on - strand, within PS417_11610 at 2497.949 kb on - strand, within PS417_11610 at 2498.456 kb on - strand, within PS417_11615 at 2498.506 kb on - strand, within PS417_11615 at 2498.931 kb on + strand at 2499.039 kb on - strand at 2499.039 kb on - strand at 2499.065 kb on + strand at 2499.066 kb on - strand at 2499.144 kb on + strand at 2499.144 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 2,496,745 + PS417_11605 0.39 -0.5 2,496,746 - PS417_11605 0.39 -0.9 2,496,746 - PS417_11605 0.39 -0.5 2,496,895 + PS417_11605 0.52 -0.3 2,497,111 - PS417_11605 0.71 +0.5 2,497,201 + PS417_11605 0.78 +0.0 2,497,201 + PS417_11605 0.78 +0.1 2,497,202 - PS417_11605 0.78 -0.5 2,497,234 + PS417_11605 0.81 +0.2 2,497,303 + PS417_11605 0.87 +1.4 2,497,802 - PS417_11610 0.47 +1.1 2,497,949 - PS417_11610 0.66 -0.4 2,498,456 - PS417_11615 0.34 -0.8 2,498,506 - PS417_11615 0.42 -0.3 2,498,931 + -0.2 2,499,039 - -0.3 2,499,039 - -0.3 2,499,065 + +0.2 2,499,066 - +0.2 2,499,144 + -0.5 2,499,144 + -0.3
Or see this region's nucleotide sequence