Experiment: Urea (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_11600 and PS417_11605 are separated by 10 nucleotides PS417_11605 and PS417_11610 overlap by 4 nucleotides PS417_11610 and PS417_11615 are separated by 10 nucleotides
PS417_11600: PS417_11600 - urea ABC transporter permease, at 2,495,361 to 2,496,278
_11600
PS417_11605: PS417_11605 - urea ABC transporter permease, at 2,496,289 to 2,497,452
_11605
PS417_11610: PS417_11610 - urea ABC transporter ATP-binding protein, at 2,497,449 to 2,498,207
_11610
PS417_11615: PS417_11615 - urea ABC transporter ATP-binding protein, at 2,498,218 to 2,498,907
_11615
Position (kb)
2496
2497
2498 Strain fitness (log2 ratio)
-1
0
1 at 2495.532 kb on + strand, within PS417_11600 at 2495.532 kb on + strand, within PS417_11600 at 2495.533 kb on - strand, within PS417_11600 at 2495.580 kb on + strand, within PS417_11600 at 2495.667 kb on + strand, within PS417_11600 at 2495.668 kb on - strand, within PS417_11600 at 2495.668 kb on - strand, within PS417_11600 at 2496.070 kb on - strand, within PS417_11600 at 2496.203 kb on - strand at 2496.277 kb on - strand at 2496.424 kb on + strand at 2496.424 kb on + strand, within PS417_11605 at 2496.424 kb on + strand, within PS417_11605 at 2496.425 kb on - strand, within PS417_11605 at 2496.745 kb on + strand, within PS417_11605 at 2496.746 kb on - strand, within PS417_11605 at 2496.746 kb on - strand, within PS417_11605 at 2496.895 kb on + strand, within PS417_11605 at 2497.111 kb on - strand, within PS417_11605 at 2497.201 kb on + strand, within PS417_11605 at 2497.201 kb on + strand, within PS417_11605 at 2497.202 kb on - strand, within PS417_11605 at 2497.234 kb on + strand, within PS417_11605 at 2497.303 kb on + strand, within PS417_11605 at 2497.802 kb on - strand, within PS417_11610 at 2497.949 kb on - strand, within PS417_11610
Per-strain Table
Position Strand Gene LocusTag Fraction Urea (N) remove 2,495,532 + PS417_11600 0.19 +0.7 2,495,532 + PS417_11600 0.19 +0.1 2,495,533 - PS417_11600 0.19 -1.3 2,495,580 + PS417_11600 0.24 -1.2 2,495,667 + PS417_11600 0.33 +0.1 2,495,668 - PS417_11600 0.33 -0.9 2,495,668 - PS417_11600 0.33 -0.1 2,496,070 - PS417_11600 0.77 -0.5 2,496,203 - -0.6 2,496,277 - -0.0 2,496,424 + -1.6 2,496,424 + PS417_11605 0.12 -1.3 2,496,424 + PS417_11605 0.12 -0.2 2,496,425 - PS417_11605 0.12 +0.0 2,496,745 + PS417_11605 0.39 -0.5 2,496,746 - PS417_11605 0.39 -0.9 2,496,746 - PS417_11605 0.39 -0.5 2,496,895 + PS417_11605 0.52 -0.3 2,497,111 - PS417_11605 0.71 +0.5 2,497,201 + PS417_11605 0.78 +0.0 2,497,201 + PS417_11605 0.78 +0.1 2,497,202 - PS417_11605 0.78 -0.5 2,497,234 + PS417_11605 0.81 +0.2 2,497,303 + PS417_11605 0.87 +1.4 2,497,802 - PS417_11610 0.47 +1.1 2,497,949 - PS417_11610 0.66 -0.4
Or see this region's nucleotide sequence