Strain Fitness in Pseudomonas simiae WCS417 around PS417_06310

Experiment: Urea (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPS417_06305 and PS417_06310 are separated by 157 nucleotidesPS417_06310 and PS417_06315 are separated by 184 nucleotidesPS417_06315 and PS417_06320 overlap by 4 nucleotides PS417_06305: PS417_06305 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,401,504 to 1,402,349 _06305 PS417_06310: PS417_06310 - enolase, at 1,402,507 to 1,403,796 _06310 PS417_06315: PS417_06315 - cell division protein FtsB, at 1,403,981 to 1,404,259 _06315 PS417_06320: PS417_06320 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,404,256 to 1,404,963 _06320 Position (kb) 1402 1403 1404Strain fitness (log2 ratio) -1 0 1at 1402.347 kb on + strandat 1402.382 kb on + strandat 1403.767 kb on + strandat 1403.767 kb on + strandat 1403.874 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Urea (N)
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1,402,347 + -0.1
1,402,382 + -0.3
1,403,767 + +1.6
1,403,767 + -1.0
1,403,874 + -0.7

Or see this region's nucleotide sequence