Experiment: Ammonium chloride (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03420 and PS417_03430 are separated by 576 nucleotides PS417_03430 and PS417_03435 overlap by 4 nucleotides
PS417_03420: PS417_03420 - hypothetical protein, at 784,645 to 788,943
_03420
PS417_03430: PS417_03430 - methyltransferase type 11, at 789,520 to 790,326
_03430
PS417_03435: PS417_03435 - cytochrome P450, at 790,323 to 792,323
_03435
Position (kb) 789
790
791 Strain fitness (log2 ratio) -1
0
1 at 788.704 kb on + strand at 788.704 kb on + strand at 788.704 kb on + strand at 788.705 kb on - strand at 788.705 kb on - strand at 788.815 kb on + strand at 788.947 kb on + strand at 788.947 kb on + strand at 789.058 kb on - strand at 789.058 kb on - strand at 789.138 kb on + strand at 789.199 kb on + strand at 789.199 kb on + strand at 789.631 kb on + strand, within PS417_03430 at 789.632 kb on - strand, within PS417_03430 at 789.669 kb on + strand, within PS417_03430 at 789.670 kb on - strand, within PS417_03430 at 790.253 kb on + strand at 790.253 kb on - strand at 790.253 kb on - strand at 790.280 kb on + strand at 790.281 kb on - strand at 790.281 kb on - strand at 790.281 kb on - strand at 790.419 kb on + strand at 790.532 kb on + strand, within PS417_03435 at 790.532 kb on + strand, within PS417_03435 at 790.533 kb on - strand, within PS417_03435 at 791.018 kb on - strand, within PS417_03435 at 791.055 kb on + strand, within PS417_03435 at 791.245 kb on - strand, within PS417_03435 at 791.323 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ammonium chloride (N) remove 788,704 + +0.1 788,704 + +0.3 788,704 + +0.1 788,705 - -0.9 788,705 - +0.7 788,815 + -0.8 788,947 + -0.0 788,947 + +0.9 789,058 - +0.3 789,058 - +0.0 789,138 + -0.2 789,199 + -0.3 789,199 + +1.2 789,631 + PS417_03430 0.14 -1.5 789,632 - PS417_03430 0.14 -0.1 789,669 + PS417_03430 0.18 -0.9 789,670 - PS417_03430 0.19 -0.4 790,253 + -0.4 790,253 - +1.0 790,253 - -1.1 790,280 + +0.2 790,281 - +0.2 790,281 - +0.4 790,281 - -0.3 790,419 + +0.5 790,532 + PS417_03435 0.10 -0.1 790,532 + PS417_03435 0.10 +0.4 790,533 - PS417_03435 0.10 +0.1 791,018 - PS417_03435 0.35 +0.4 791,055 + PS417_03435 0.37 -0.4 791,245 - PS417_03435 0.46 +0.3 791,323 + -0.8
Or see this region's nucleotide sequence