Experiment: Inosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_06365 and PS417_06370 are separated by 206 nucleotides PS417_06370 and PS417_06375 are separated by 388 nucleotides
PS417_06365: PS417_06365 - RNA polymerase sigma factor, at 1,412,215 to 1,413,219
_06365
PS417_06370: PS417_06370 - cold-shock protein, at 1,413,426 to 1,413,635
_06370
PS417_06375: PS417_06375 - deoxycytidine triphosphate deaminase, at 1,414,024 to 1,414,590
_06375
Position (kb)
1413
1414 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1412.554 kb on + strand, within PS417_06365 at 1412.662 kb on + strand at 1412.662 kb on + strand, within PS417_06365 at 1412.662 kb on + strand, within PS417_06365 at 1413.101 kb on + strand, within PS417_06365 at 1413.277 kb on + strand at 1413.277 kb on + strand at 1413.277 kb on + strand at 1413.344 kb on + strand at 1413.345 kb on - strand at 1413.374 kb on + strand at 1413.391 kb on + strand at 1413.413 kb on - strand at 1413.413 kb on - strand at 1413.432 kb on - strand at 1413.608 kb on + strand, within PS417_06370 at 1413.609 kb on - strand, within PS417_06370 at 1413.640 kb on + strand at 1413.640 kb on + strand at 1413.640 kb on + strand at 1413.640 kb on + strand at 1413.641 kb on - strand at 1413.641 kb on - strand at 1413.641 kb on - strand at 1413.641 kb on - strand at 1413.658 kb on + strand at 1413.659 kb on - strand at 1413.744 kb on + strand at 1413.744 kb on + strand at 1413.744 kb on + strand at 1413.744 kb on + strand at 1413.745 kb on - strand at 1413.745 kb on - strand at 1413.745 kb on - strand at 1413.793 kb on - strand at 1413.821 kb on - strand at 1413.859 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.883 kb on + strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.884 kb on - strand at 1413.888 kb on - strand at 1413.888 kb on - strand at 1413.902 kb on - strand at 1413.913 kb on - strand at 1414.007 kb on + strand at 1414.354 kb on - strand, within PS417_06375 at 1414.603 kb on - strand at 1414.619 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (N) remove 1,412,554 + PS417_06365 0.34 +0.9 1,412,662 + +2.4 1,412,662 + PS417_06365 0.44 +1.4 1,412,662 + PS417_06365 0.44 +0.2 1,413,101 + PS417_06365 0.88 +1.0 1,413,277 + +0.0 1,413,277 + +0.0 1,413,277 + +0.4 1,413,344 + -0.0 1,413,345 - +0.8 1,413,374 + +0.6 1,413,391 + +1.4 1,413,413 - +0.8 1,413,413 - +0.4 1,413,432 - +0.7 1,413,608 + PS417_06370 0.87 +0.4 1,413,609 - PS417_06370 0.87 -0.7 1,413,640 + +1.1 1,413,640 + +0.0 1,413,640 + +1.4 1,413,640 + +0.6 1,413,641 - -0.6 1,413,641 - +1.2 1,413,641 - +1.1 1,413,641 - +0.5 1,413,658 + +0.4 1,413,659 - +0.2 1,413,744 + +0.4 1,413,744 + -0.4 1,413,744 + +0.4 1,413,744 + +0.9 1,413,745 - +0.6 1,413,745 - +0.5 1,413,745 - +0.5 1,413,793 - +0.4 1,413,821 - -0.2 1,413,859 + +0.6 1,413,883 + -0.2 1,413,883 + +0.1 1,413,883 + +0.3 1,413,883 + +0.7 1,413,883 + +0.8 1,413,883 + +0.6 1,413,883 + +0.2 1,413,883 + -2.3 1,413,883 + +0.4 1,413,883 + +0.5 1,413,883 + -0.7 1,413,883 + +0.8 1,413,883 + +0.4 1,413,884 - -0.3 1,413,884 - -1.2 1,413,884 - +0.0 1,413,884 - -0.1 1,413,884 - -0.3 1,413,884 - +1.0 1,413,884 - +0.2 1,413,884 - +0.1 1,413,884 - -0.5 1,413,884 - -0.2 1,413,888 - +0.2 1,413,888 - +0.5 1,413,902 - -1.2 1,413,913 - -0.1 1,414,007 + +0.3 1,414,354 - PS417_06375 0.58 -4.2 1,414,603 - -0.2 1,414,619 - -0.2
Or see this region's nucleotide sequence