Experiment: Uridine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03340 and PS417_03345 are separated by 242 nucleotides PS417_03345 and PS417_03350 are separated by 18 nucleotides
PS417_03340: PS417_03340 - gluconate transporter, at 765,701 to 767,071
_03340
PS417_03345: PS417_03345 - type I secretion protein TolC, at 767,314 to 768,534
_03345
PS417_03350: PS417_03350 - cytochrome C peroxidase, at 768,553 to 769,659
_03350
Position (kb) 767
768
769 Strain fitness (log2 ratio) -1
0
1
2 at 766.357 kb on + strand, within PS417_03340 at 766.425 kb on - strand, within PS417_03340 at 766.939 kb on + strand at 767.027 kb on - strand at 767.063 kb on + strand at 767.064 kb on - strand at 767.135 kb on + strand at 767.136 kb on - strand at 767.143 kb on - strand at 767.143 kb on - strand at 767.162 kb on + strand at 767.162 kb on + strand at 767.162 kb on + strand at 767.162 kb on + strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.163 kb on - strand at 767.258 kb on - strand at 767.288 kb on + strand at 767.695 kb on + strand, within PS417_03345 at 767.695 kb on + strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 767.696 kb on - strand, within PS417_03345 at 768.088 kb on - strand, within PS417_03345 at 768.122 kb on - strand, within PS417_03345 at 768.326 kb on + strand, within PS417_03345 at 768.458 kb on - strand at 768.512 kb on - strand at 768.552 kb on + strand at 768.757 kb on - strand, within PS417_03350 at 768.979 kb on + strand, within PS417_03350 at 768.980 kb on - strand, within PS417_03350 at 769.493 kb on + strand, within PS417_03350 at 769.493 kb on + strand, within PS417_03350 at 769.494 kb on - strand, within PS417_03350
Per-strain Table
Position Strand Gene LocusTag Fraction Uridine (N) remove 766,357 + PS417_03340 0.48 +0.2 766,425 - PS417_03340 0.53 +0.6 766,939 + +0.6 767,027 - -0.1 767,063 + +0.2 767,064 - -0.5 767,135 + +0.1 767,136 - +0.1 767,143 - -0.5 767,143 - -0.2 767,162 + -0.4 767,162 + +2.4 767,162 + +0.7 767,162 + +0.6 767,163 - -0.5 767,163 - -1.6 767,163 - +0.5 767,163 - -0.1 767,163 - +0.1 767,163 - -1.6 767,163 - -0.2 767,163 - -0.2 767,258 - -0.0 767,288 + -0.1 767,695 + PS417_03345 0.31 -0.6 767,695 + PS417_03345 0.31 -0.4 767,696 - PS417_03345 0.31 +1.0 767,696 - PS417_03345 0.31 -0.2 767,696 - PS417_03345 0.31 +0.7 767,696 - PS417_03345 0.31 -0.5 767,696 - PS417_03345 0.31 +0.4 768,088 - PS417_03345 0.63 -0.2 768,122 - PS417_03345 0.66 +1.3 768,326 + PS417_03345 0.83 -0.0 768,458 - +0.1 768,512 - +0.2 768,552 + -0.4 768,757 - PS417_03350 0.18 +0.3 768,979 + PS417_03350 0.38 -0.4 768,980 - PS417_03350 0.39 -0.2 769,493 + PS417_03350 0.85 -0.4 769,493 + PS417_03350 0.85 -0.1 769,494 - PS417_03350 0.85 +1.5
Or see this region's nucleotide sequence