Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_00290 and PS417_00295 are separated by 131 nucleotides PS417_00295 and PS417_00300 are separated by 367 nucleotides
PS417_00290: PS417_00290 - SulP family inorganic anion transporter, at 56,412 to 57,959
_00290
PS417_00295: PS417_00295 - hypothetical protein, at 58,091 to 58,738
_00295
PS417_00300: PS417_00300 - cytochrome B559 subunit alpha, at 59,106 to 60,233
_00300
Position (kb)
58
59 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 57.333 kb on - strand, within PS417_00290 at 57.471 kb on + strand, within PS417_00290 at 57.542 kb on + strand, within PS417_00290 at 57.543 kb on - strand, within PS417_00290 at 57.543 kb on - strand, within PS417_00290 at 57.543 kb on - strand, within PS417_00290 at 57.547 kb on - strand, within PS417_00290 at 57.595 kb on + strand, within PS417_00290 at 57.595 kb on + strand, within PS417_00290 at 57.802 kb on - strand, within PS417_00290 at 57.802 kb on - strand, within PS417_00290 at 57.934 kb on + strand at 57.934 kb on + strand at 57.935 kb on - strand at 58.077 kb on - strand at 58.080 kb on - strand at 58.080 kb on - strand at 58.256 kb on + strand, within PS417_00295 at 58.364 kb on - strand, within PS417_00295 at 58.365 kb on + strand, within PS417_00295 at 58.365 kb on + strand, within PS417_00295 at 58.366 kb on - strand, within PS417_00295 at 58.366 kb on - strand, within PS417_00295 at 58.404 kb on + strand, within PS417_00295 at 58.405 kb on - strand, within PS417_00295 at 58.405 kb on - strand, within PS417_00295 at 58.573 kb on - strand, within PS417_00295 at 58.761 kb on + strand at 58.762 kb on - strand at 58.783 kb on + strand at 58.784 kb on - strand at 58.784 kb on - strand at 58.792 kb on + strand at 58.794 kb on + strand at 58.794 kb on + strand at 58.794 kb on + strand at 58.794 kb on + strand at 58.875 kb on + strand at 58.962 kb on + strand at 58.985 kb on - strand at 59.030 kb on + strand at 59.031 kb on - strand at 59.038 kb on - strand at 59.187 kb on - strand at 59.439 kb on + strand, within PS417_00300 at 59.439 kb on + strand, within PS417_00300 at 59.440 kb on - strand, within PS417_00300 at 59.499 kb on + strand, within PS417_00300 at 59.505 kb on + strand, within PS417_00300 at 59.505 kb on + strand, within PS417_00300 at 59.505 kb on + strand, within PS417_00300 at 59.589 kb on + strand, within PS417_00300 at 59.589 kb on + strand, within PS417_00300 at 59.590 kb on - strand, within PS417_00300 at 59.590 kb on - strand, within PS417_00300
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 57,333 - PS417_00290 0.59 -0.2 57,471 + PS417_00290 0.68 -0.6 57,542 + PS417_00290 0.73 +0.0 57,543 - PS417_00290 0.73 -0.4 57,543 - PS417_00290 0.73 +0.8 57,543 - PS417_00290 0.73 +0.6 57,547 - PS417_00290 0.73 +0.7 57,595 + PS417_00290 0.76 -0.5 57,595 + PS417_00290 0.76 +0.0 57,802 - PS417_00290 0.90 +0.3 57,802 - PS417_00290 0.90 -3.0 57,934 + -0.3 57,934 + -0.0 57,935 - -0.5 58,077 - -1.0 58,080 - +0.3 58,080 - +0.0 58,256 + PS417_00295 0.25 -0.1 58,364 - PS417_00295 0.42 -1.6 58,365 + PS417_00295 0.42 -0.1 58,365 + PS417_00295 0.42 -1.4 58,366 - PS417_00295 0.42 +0.5 58,366 - PS417_00295 0.42 -1.1 58,404 + PS417_00295 0.48 +0.2 58,405 - PS417_00295 0.48 -1.1 58,405 - PS417_00295 0.48 -1.0 58,573 - PS417_00295 0.74 -0.6 58,761 + +0.1 58,762 - -0.3 58,783 + -0.5 58,784 - +0.0 58,784 - +0.8 58,792 + -1.1 58,794 + +1.0 58,794 + -0.2 58,794 + -1.4 58,794 + -2.8 58,875 + -0.6 58,962 + -0.4 58,985 - +0.3 59,030 + -0.8 59,031 - +0.2 59,038 - +1.2 59,187 - +0.2 59,439 + PS417_00300 0.30 -0.1 59,439 + PS417_00300 0.30 +0.6 59,440 - PS417_00300 0.30 +0.3 59,499 + PS417_00300 0.35 +1.1 59,505 + PS417_00300 0.35 +0.2 59,505 + PS417_00300 0.35 +0.3 59,505 + PS417_00300 0.35 +0.6 59,589 + PS417_00300 0.43 +0.3 59,589 + PS417_00300 0.43 -1.0 59,590 - PS417_00300 0.43 -0.0 59,590 - PS417_00300 0.43 -0.5
Or see this region's nucleotide sequence