Experiment: Adenine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_08025 and PS417_08030 overlap by 20 nucleotides PS417_08030 and PS417_08035 are separated by 122 nucleotides
PS417_08025: PS417_08025 - acetylornithine aminotransferase, at 1,755,411 to 1,756,580
_08025
PS417_08030: PS417_08030 - transcriptional regulator, at 1,756,561 to 1,757,484
_08030
PS417_08035: PS417_08035 - adenine transporter (MFS superfamily) (from data) , at 1,757,607 to 1,758,797
_08035
Position (kb)
1756
1757
1758 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 1755.725 kb on + strand, within PS417_08025 at 1755.887 kb on - strand, within PS417_08025 at 1756.211 kb on + strand, within PS417_08025 at 1756.775 kb on - strand, within PS417_08030 at 1756.870 kb on + strand, within PS417_08030 at 1757.096 kb on + strand, within PS417_08030 at 1757.096 kb on + strand, within PS417_08030 at 1757.097 kb on - strand, within PS417_08030 at 1757.380 kb on - strand, within PS417_08030 at 1757.382 kb on - strand, within PS417_08030 at 1757.382 kb on - strand, within PS417_08030 at 1757.382 kb on - strand, within PS417_08030 at 1757.679 kb on + strand at 1757.679 kb on + strand at 1757.679 kb on + strand at 1757.679 kb on + strand at 1757.679 kb on + strand at 1757.679 kb on + strand at 1757.679 kb on + strand at 1757.680 kb on - strand at 1757.680 kb on - strand at 1757.680 kb on - strand at 1757.680 kb on - strand at 1757.680 kb on - strand at 1757.680 kb on - strand at 1757.680 kb on - strand at 1757.750 kb on + strand, within PS417_08035 at 1758.140 kb on - strand, within PS417_08035 at 1758.223 kb on + strand, within PS417_08035 at 1758.223 kb on + strand, within PS417_08035 at 1758.224 kb on - strand, within PS417_08035 at 1758.224 kb on - strand, within PS417_08035 at 1758.224 kb on - strand, within PS417_08035 at 1758.342 kb on + strand, within PS417_08035 at 1758.343 kb on - strand, within PS417_08035 at 1758.343 kb on - strand, within PS417_08035 at 1758.346 kb on + strand, within PS417_08035 at 1758.346 kb on + strand, within PS417_08035 at 1758.347 kb on - strand, within PS417_08035 at 1758.347 kb on - strand, within PS417_08035 at 1758.347 kb on - strand, within PS417_08035 at 1758.378 kb on + strand, within PS417_08035 at 1758.379 kb on - strand, within PS417_08035 at 1758.379 kb on - strand, within PS417_08035 at 1758.444 kb on + strand, within PS417_08035
Per-strain Table
Position Strand Gene LocusTag Fraction Adenine (N) remove 1,755,725 + PS417_08025 0.27 +0.7 1,755,887 - PS417_08025 0.41 -0.7 1,756,211 + PS417_08025 0.68 -0.5 1,756,775 - PS417_08030 0.23 -3.2 1,756,870 + PS417_08030 0.33 -3.5 1,757,096 + PS417_08030 0.58 -1.3 1,757,096 + PS417_08030 0.58 -3.6 1,757,097 - PS417_08030 0.58 -1.4 1,757,380 - PS417_08030 0.89 -3.1 1,757,382 - PS417_08030 0.89 -3.9 1,757,382 - PS417_08030 0.89 -3.3 1,757,382 - PS417_08030 0.89 -3.5 1,757,679 + +1.0 1,757,679 + -0.5 1,757,679 + -4.1 1,757,679 + -2.7 1,757,679 + -2.5 1,757,679 + -1.5 1,757,679 + -4.2 1,757,680 - -3.1 1,757,680 - -2.1 1,757,680 - -5.8 1,757,680 - -2.7 1,757,680 - -1.5 1,757,680 - -3.3 1,757,680 - -1.0 1,757,750 + PS417_08035 0.12 -2.3 1,758,140 - PS417_08035 0.45 -5.3 1,758,223 + PS417_08035 0.52 -2.4 1,758,223 + PS417_08035 0.52 -3.7 1,758,224 - PS417_08035 0.52 -5.4 1,758,224 - PS417_08035 0.52 -3.9 1,758,224 - PS417_08035 0.52 -1.5 1,758,342 + PS417_08035 0.62 -2.1 1,758,343 - PS417_08035 0.62 -3.9 1,758,343 - PS417_08035 0.62 -1.5 1,758,346 + PS417_08035 0.62 -3.3 1,758,346 + PS417_08035 0.62 -4.4 1,758,347 - PS417_08035 0.62 -3.0 1,758,347 - PS417_08035 0.62 -2.9 1,758,347 - PS417_08035 0.62 -4.5 1,758,378 + PS417_08035 0.65 +0.3 1,758,379 - PS417_08035 0.65 -4.1 1,758,379 - PS417_08035 0.65 -2.8 1,758,444 + PS417_08035 0.70 -4.8
Or see this region's nucleotide sequence